PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s914051g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | Nin-like | ||||||||
Protein Properties | Length: 193aa MW: 21755.6 Da PI: 10.5414 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 39.2 | 1.4e-12 | 72 | 117 | 2 | 47 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47 k+is e+l++ +lp k AA +Lg+++T+ +CR +GIk WP+ PDK_30s914051g001 72 RKNISREKLQQLSYLPRKLAAWKLGMSVTTFRLRCRDHGIKPWPYK 117 69******************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 12.741 | 57 | 145 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 6.1E-11 | 74 | 118 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
AAENVPSQTV EITKSRIGES DLPPETDDLG GSSQLSSGYA TGTLPVSGTV GRGGLSGPKK 60 KKTEIAAQRE RRKNISREKL QQLSYLPRKL AAWKLGMSVT TFRLRCRDHG IKPWPYKQRV 120 NRCTQNTRHS SSTIEVHKLE ARMEEMRQSH QIEMQSLRAQ LNNIVSLIHR FVPSQVPDTF 180 KSRRDDDDAA FDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 63 | PKKKKTE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_026657427.1 | 1e-109 | uncharacterized protein LOC113461522 | ||||
TrEMBL | A0A3Q0HVF1 | 1e-107 | A0A3Q0HVF1_PHODC; uncharacterized protein LOC113461522 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 1e-06 | RWP-RK domain-containing protein |