PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s714041g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 294aa    MW: 32161 Da    PI: 8.3506
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s714041g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.28.9e-341872155
            G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                       ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  PDK_30s714041g001 18 RQRLRWTHELHERFVDAVTQLGGPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRL 72
                       58****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.9671575IPR017930Myb domain
SuperFamilySSF466891.11E-171772IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-321773IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-251973IPR006447Myb domain, plants
PfamPF002496.6E-92071IPR001005SANT/Myb domain
PfamPF143791.5E-23104150IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MGPGSGGTDP NNPNLASRQR LRWTHELHER FVDAVTQLGG PDRATPKGVL RIMGVQGLTI  60
YHVKSHLQKY RLAKYVPESS SDGSKGEKKD PGDLLSGLEN SSGMQITEAL KLQMEVQKRL  120
HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LNGVLAETPG VSIPAPISGD HCQDSDKTDP  180
STPAPTSESP RQDKAASGDH GGTGGLFKSL SRDDSFSSRR EPLTPDSSCH AGSPESPKPE  240
RRIKRQRGAG DPGNGKMELV FAHHILESTA PSDHLFSSLQ PQSTPSNCQL WCRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A6e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008794708.10.0myb family transcription factor PHL7-like isoform X1
RefseqXP_008794712.10.0myb family transcription factor PHL7-like isoform X2
RefseqXP_008794713.10.0myb family transcription factor PHL7-like isoform X2
RefseqXP_026661863.10.0myb family transcription factor PHL7-like isoform X1
RefseqXP_026661864.10.0myb family transcription factor PHL7-like isoform X1
RefseqXP_026661865.10.0myb family transcription factor PHL7-like isoform X1
RefseqXP_026661866.10.0myb family transcription factor PHL7-like isoform X2
RefseqXP_026661867.10.0myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW01e-112PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2H3Y7Q90.0A0A2H3Y7Q9_PHODC; myb family transcription factor PHL7-like isoform X1
TrEMBLA0A2H3Y8D80.0A0A2H3Y8D8_PHODC; myb family transcription factor PHL7-like isoform X2
STRINGXP_008794707.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-83G2-like family protein