PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s698051g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 507aa    MW: 57978.8 Da    PI: 4.8325
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s698051g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.39.9e-3021341128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra...tksgyWkatg 87 
                        lppGf F+P+de l+v yLk+k+ + +l++ +vi e+d+y ++P+dL  +  +++++ ew+fF+++ +k++  ++++ra   +  g+Wkat 
  PDK_30s698051g001   2 LPPGFLFRPSDEVLLVTYLKNKLLQWPLPC-DVIVEADVYGCHPQDLAlEyLMANRDFEWFFFTSTPRKHPGASETSRAsrrAGLGRWKATK 92 
                        79****************************.99**************85335555666************96655555411166899***** PP

                NAM  88 kdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
                          k+v+++k++++g kk++ + ++++  ge k+ W+m+e+++
  PDK_30s698051g001  93 GVKNVVDSKNNTIGSKKSFCYMEQNSDGGEnKSIWLMEEFSM 134
                        **********************886666644999******87 PP
2NAM96.83.2e-302533851128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyat...gkrknratksgyWkatg 87 
                        +ppGf F+Ptd el++++Lk+k+ +++l++ ++ike+d+y  +P++L  + +++++++ew+fF+ + +k+++   ++r++r++ +g+Wk+  
  PDK_30s698051g001 253 VPPGFIFQPTDAELLDFFLKEKLLHQPLPC-DIIKEADVYGNHPSNLTaQmAMANGNSEWFFFTWTTRKHPNaeaSTRASRVAGQGRWKSAQ 343
                        69****************************.99**************84236666888***********997222558888889******** PP

                NAM  88 kdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                        + k+vl+++g+++g k+ + + +     k ek+ W+m+ey++
  PDK_30s698051g001 344 SVKPVLNSEGQVIGSKQNFSYMERtLLGKEEKSIWLMEEYSI 385
                        **********************6524567789********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-362163IPR003441NAC domain
PROSITE profilePS5100535.4772163IPR003441NAC domain
PfamPF023652.5E-153133IPR003441NAC domain
SuperFamilySSF1019411.05E-31250387IPR003441NAC domain
PROSITE profilePS5100533.064253422IPR003441NAC domain
PfamPF023654.3E-16254385IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MLPPGFLFRP SDEVLLVTYL KNKLLQWPLP CDVIVEADVY GCHPQDLALE YLMANRDFEW  60
FFFTSTPRKH PGASETSRAS RRAGLGRWKA TKGVKNVVDS KNNTIGSKKS FCYMEQNSDG  120
GENKSIWLME EFSMQNLRRR GSAGEMRDTN ELDDWVISKI YLTPKARKAH ADLKQFASAT  180
LEPAFKRRRI ELDDWVVCKI YLRPSARKEL CGTELPTMES RELEVQEIWY QPFVLPIQQI  240
TEGFDQEPEY TMVPPGFIFQ PTDAELLDFF LKEKLLHQPL PCDIIKEADV YGNHPSNLTA  300
QMAMANGNSE WFFFTWTTRK HPNAEASTRA SRVAGQGRWK SAQSVKPVLN SEGQVIGSKQ  360
NFSYMERTLL GKEEKSIWLM EEYSIQNLRR CGGAAMTMDR NKQIIEGLDQ EVEFCSCKSH  420
DSLLQYPFPD ELQENFKSLP ADKILQQFAD APDTNSDILQ LPTLDELEKI FESPLADEIL  480
QQFADAPDEG VGVEQHDMMS FSPPCST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-21239617163NO APICAL MERISTEM PROTEIN
1ut4_B2e-21239617163NO APICAL MERISTEM PROTEIN
1ut7_A2e-21239617163NO APICAL MERISTEM PROTEIN
1ut7_B2e-21239617163NO APICAL MERISTEM PROTEIN
3swm_A3e-21239620166NAC domain-containing protein 19
3swm_B3e-21239620166NAC domain-containing protein 19
3swm_C3e-21239620166NAC domain-containing protein 19
3swm_D3e-21239620166NAC domain-containing protein 19
3swp_A3e-21239620166NAC domain-containing protein 19
3swp_B3e-21239620166NAC domain-containing protein 19
3swp_C3e-21239620166NAC domain-containing protein 19
3swp_D3e-21239620166NAC domain-containing protein 19
4dul_A2e-21239617163NAC domain-containing protein 19
4dul_B2e-21239617163NAC domain-containing protein 19
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185189KRRRI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026657805.19e-90NAC domain-containing protein 30-like
TrEMBLA0A3Q0HWS32e-88A0A3Q0HWS3_PHODC; NAC domain-containing protein 30-like
STRINGXP_008793755.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2940424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.16e-25NAC domain containing protein 86