PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s65509159g002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 26366.6 Da PI: 9.9675 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.3 | 1.4e-11 | 109 | 150 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa+++++a+ PDK_30s65509159g002 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 150 59**98..47*********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 8.663 | 84 | 164 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.1E-4 | 108 | 165 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.9E-8 | 108 | 153 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 8.3E-6 | 109 | 151 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.0E-6 | 111 | 154 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MVSIRRRRYL GLCTGKGSVP VELPKPAEKG NAVEYPNQNI KPFSVHPMPP DNLGFQKPVN 60 ISEAFPGSSN ASGSSSSKEE ANHYYPGKQI KRRKRHRRKH YEDQEPCMMR GVYFKNMKWQ 120 AAIKVDKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL LEEEKRELSQ YNWDEFLEMT 180 RNAINNKKHQ KRLGAGRQKK PESQLQSSDG ERERSIHGSS VSDNGDADTS V |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008810643.1 | 1e-174 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_026666181.1 | 1e-174 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Swissprot | Q56XP9 | 2e-39 | ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040 | ||||
TrEMBL | A0A2H3Z9T7 | 1e-173 | A0A2H3Z9T7_PHODC; ethylene-responsive transcription factor-like protein At4g13040 | ||||
STRING | XP_008810643.1 | 1e-173 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7516 | 35 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 1e-47 | ERF family protein |