PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s655041g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Nin-like

Protein Properties

Length: 184aa MW: 20298.7 Da PI: 9.3559

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s655041g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	55.6	1e-17	119	163	2	46
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 +k+i+ edl++ F+lp ++AA+ Lg+++T+LK+ R++GI+RWP+ PDK_30s655041g001 119 TKNITREDLEQLFHLPREQAAQVLGLSVTTLKKLNRKHGIPRWPY 163 89******************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.868	109	184	IPR003035	RWP-RK domain
Pfam	PF02042	6.9E-18	121	165	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence Send to blast
QENVPFRYPH STEPPLGPQS SRSSSFPGQA ESFPPSLPPV TSNDVALASY QAAAPENVPS 60 RTVEITKSLI RESDLPPETD LGGSSQLTSG HATGTEGRGG DLTRPKKKKT GIAAQRERTK 120 NITREDLEQL FHLPREQAAQ VLGLSVTTLK KLNRKHGIPR WPYERPEEKY DFYPFVDPVT 180 GQPK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026657426.1	7e-89	uncharacterized protein LOC113461521, partial
TrEMBL	A0A3Q0HS74	2e-87	A0A3Q0HS74_PHODC; uncharacterized protein LOC113461521

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	2e-08	RWP-RK domain-containing protein