PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1210051g004
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family CAMTA
Protein Properties Length: 1090aa    MW: 123005 Da    PI: 5.8391
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1210051g004genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1143.46.2e-456415131118
                CG-1  31 ktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                         + r   gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een++fqrr+yw+Lee++ +ivlvhylevk
  PDK_30s1210051g004  64 RGRSAGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEENENFQRRSYWMLEEDYMHIVLVHYLEVK 151
                         567789*******************************************************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143764.21442156IPR005559CG-1 DNA-binding domain
SMARTSM010761.1E-5346151IPR005559CG-1 DNA-binding domain
PfamPF038591.8E-3760150IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.0E-5478568IPR013783Immunoglobulin-like fold
PfamPF018331.6E-7481559IPR002909IPT domain
SuperFamilySSF812962.97E-17481567IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.4E-18663778IPR020683Ankyrin repeat-containing domain
CDDcd002044.78E-15672775No hitNo description
SuperFamilySSF484032.49E-17673778IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029717.555674777IPR020683Ankyrin repeat-containing domain
PfamPF127962.0E-7688778IPR020683Ankyrin repeat-containing domain
SMARTSM002480.028716745IPR002110Ankyrin repeat
SMARTSM00248560755784IPR002110Ankyrin repeat
SuperFamilySSF525407.7E-9888944IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.073891913IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.444892921IPR000048IQ motif, EF-hand binding site
PfamPF006120.0021893912IPR000048IQ motif, EF-hand binding site
SMARTSM000150.004914936IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.542915939IPR000048IQ motif, EF-hand binding site
PfamPF006121.7E-4917936IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1090 aa     Download sequence    Send to blast
MADARRYGLT PQLGTILSRY FWKHNIDGYA LQKFVKFFET IRNFALPQNR QINLLDLIIS  60
FVLRGRSAGG SLFLFDRKVL RYFRKDGHNW RKKKDGKTVK EAHERLKAGS IDVLHCYYAH  120
GEENENFQRR SYWMLEEDYM HIVLVHYLEV KGNKPSFSRA RDVDEIAQVA NMDSPVCSNS  180
FTNHSQLPSQ TTSAESPNST HTSEYEDAES DNYQASSRYN SFLEMQQHGD GPVMDVRLLN  240
PHVPIDSVNN QCENDSDIQG TKATEPKSDF YSVLQENITR VFDETGLGLT FSGPRTQFDL  300
TSWDEVLEHC TTGFQAPSFY PAVASTQSAT VEDNLRLETS TLGELHTDDL GFKQVDVTSA  360
QDKSLWQLSN ADIGPLVTPN VDLQHGTSIE ENVNAPSLIT QASLDFSNIE GEGLKKYDSF  420
SRWMSNELGE VDDSHMKPSS GLYWNTVESE SVVEDSSMSN REHFDAYIMN PSLSQDQLFS  480
IIDFTPNWAY AGMETKVLIT GTFLKNKEDV EKCQWSCMFG EIEVPAEILT DGTLRCHAPL  540
HKSGRVPFYV TCSNRLACSE VREFEFREND AQYMEASDSY GYNTNEMCLH IRLEKLLTLG  600
PVDHQKAVPD SAKENLHLRN KISSLMMEAN DEWSNLVKLT HEGFSPDNAK DQLLEKLMKE  660
KLHSWLLHKV SEGGKGPNVL DKEGQGVLHL AAALGYDWAI RPTITAGVSI NFRDVHGWTA  720
LHWAANYGRE RTVVALIALD AAPGALTDPT PEYPTGRTPA DLASANGHKG IAGFLAESSL  780
TNHLSTLTLK ESKGSDVAEI SGITDVEDVA EKSAIQVADG DVQAGLSLKD SLSAVRNASL  840
AAARIYQVFR VHSFHRKKVI EYGDDKCGIS DERALSLISL KTAKPGQHDM PLHAAAIRIQ  900
NKFRGWKGRK EFLIIRQRIV KIQAHVRGYQ VRKQYKKIVW SVLIVEKAIL RWRRKGSGLR  960
GFRPEGQLEG PTMQNQGAKE DDYDFLQEGR KQTEARLQKA LARVKSMVQY PEARDQYRRL  1020
LNVVTELQES KKYDENTTRH LCVEGCQLVD QFVGKAMQDR ILKESEEAAA DDFMIELEEL  1080
WQDDTLMPTA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008795548.10.0calmodulin-binding transcription activator 3-like isoform X2
TrEMBLA0A2H3Y9P00.0A0A2H3Y9P0_PHODC; calmodulin-binding transcription activator 3-like isoform X2
STRINGXP_008795547.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1