PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1074581g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | Trihelix | ||||||||
Protein Properties | Length: 314aa MW: 35245.1 Da PI: 9.2952 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 27.3 | 9.5e-09 | 4 | 44 | 44 | 86 |
trihelix 44 erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +++p qCk+k+e+++kry+++ + + + ++s+s+++++ +++ PDK_30s1074581g001 4 HKTPSQCKNKIESMKKRYRAESAAAHE--PNSRSSWQFYARMD 44 789*****************9999998..788888******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 3.3E-10 | 4 | 45 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MKGHKTPSQC KNKIESMKKR YRAESAAAHE PNSRSSWQFY ARMDGLLKGT PNCSAQPKSH 60 HDINLQALPK VENEVDVMGR LQDSNQDDAS NTSPVDGEAV KNDNVDKKES RGDSDGSAPR 120 SKAANAEDKA GRDGNPSKRR KESGNEVADS IRLLAESILK VEQAKMEMYK DSERMRADAE 180 IKRGEMELKR TEIIAKTQLQ IAKLFAKKSQ GRSSKTEGSS LRTEFDMLPT RDGTVFCTKI 240 TIDFLIHIIF PAFNVKVFFL PISVKVALAY GYATFNMGSL RFTLLLNYYC TFRCSLFKDL 300 ECIYGHVILL NLDP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008789713.1 | 1e-169 | trihelix transcription factor ASIL1-like | ||||
TrEMBL | A0A2H3XWH4 | 1e-168 | A0A2H3XWH4_PHODC; trihelix transcription factor ASIL1-like | ||||
STRING | XP_008789713.1 | 1e-169 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7333 | 33 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54390.1 | 2e-38 | sequence-specific DNA binding transcription factors |