PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1069501g005

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Dof

Protein Properties

Length: 330aa MW: 35102.1 Da PI: 8.0581

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1069501g005	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	105.4	3.1e-33	53	102	2	51
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPv 51 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnv PDK_30s1069501g005 53 PQQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVKA 102 78999******************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	9.0E-21	53	105	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.3E-28	55	104	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	25.387	57	111	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	59	95	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence Send to blast
MIQELLGGAV EERKISIPGS LLIDPSSSSS SSTSISSASL SSNSSSPSTT SEPQQNLRCP 60 RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV KAAPGIAAAG GSKLGATKAK 120 SASTDLLARS GIGGGLEHEL PSSPILWASP HTSHLVSLLR ATSYQNPNPS THSRTTLNSV 180 RNEEDGAMIG TRMEADKVGV LHSPGLTLDP LGQLPITLSG ALWRNGNQYA YQQQPQPQQT 240 QQHGNMLLGE APSSGIQELY QRIKSSANYC NDQLQAVMSN MGCLDSSTSS AGTSAATSIL 300 EPIPLSGGEF NYWNPALNWS DLPTTNGALP

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AM084363	5e-45	AM084363.1 Hordeum vulgare subsp. vulgare partial dof15 gene for dof zinc finger protein 15.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010941851.1	1e-163	dof zinc finger protein 2
TrEMBL	A0A2H3Y2U9	1e-158	A0A2H3Y2U9_PHODC; dof zinc finger protein DOF2.2-like
STRING	XP_008792599.1	1e-159	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7710	31	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-27	DOF zinc finger protein 1