PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr041410.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 267aa    MW: 28753.1 Da    PI: 8.8575
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr041410.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.40.000141471851255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ +++  L++l+ +      +K + a++L +A+ YI+ Lq
  Pbr041410.1 147 RKEKLGERITALQQLVSPY-----GKTDTASVLHEAMGYIRFLQ 185
                  67788899999*****999.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.096135184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-8146191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.53E-6146189No hitNo description
SuperFamilySSF474593.01E-11146197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MAESGGFEGD HLAVTEGTSF SQLLFAADEV VNLAVNSDQT FNYTRSSTYP TQIKPPKMLC  60
FGNYDHQTDV NRVEIGFSET AKKSAITCSS SSSVSSTSTA SISALPNSKN KRRNGLAPIS  120
STTTPTTQRA TKKTKTENRS SAGNGKRKEK LGERITALQQ LVSPYGKTDT ASVLHEAMGY  180
IRFLQEQVQV LCSPYLQRLE PPSQPVPGGV GEVKQEAGRS DLRSRGLCLV PMEYTMHVAN  240
SNGADFWLPA MANTNINPVS SPSTNY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr041410.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018500809.10.0PREDICTED: transcription factor bHLH113-like
TrEMBLA0A498JXJ61e-169A0A498JXJ6_MALDO; Uncharacterized protein
STRINGXP_009346862.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103212129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.12e-46bHLH family protein