PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr040823.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 183aa    MW: 20664 Da    PI: 9.1707
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr040823.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.99.4e-131338126
      G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                 k+rlrWt+eLH+rFveav++LGG+++
  Pbr040823.1 13 KERLRWTQELHDRFVEAVTKLGGPDQ 38
                 68*********************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.42E-51254IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.5E-111250IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-81338IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MGSSRSASSG ANKERLRWTQ ELHDRFVEAV TKLGGPDQGK LQKKNISEML PNFGPTSRLS  60
DQHEVQKSLK QKFEAQGRFL ERYSAERHNT NKNRPILITK PKKAPLSQTS LPSLCDDSES  120
NAKDFASDSE PGRSETQSSA EQFQALKKKL RLHHHQNDHN VQLALNSEFC YIPHEDDHIS  180
FP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr040823.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008370148.12e-94myb family transcription factor PHL7-like
TrEMBLA0A498IIE21e-107A0A498IIE2_MALDO; Uncharacterized protein
STRINGXP_008370148.18e-94(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.16e-11G2-like family protein