PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr038570.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 260aa    MW: 27769.1 Da    PI: 8.3038
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr038570.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000141461841255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ +++  L++l+ +      +K + a++L +A+ YI+ Lq
  Pbr038570.1 146 RKEKLGERITALQQLVSPY-----GKTDTASVLHEAMGYIRFLQ 184
                  67788899999*****999.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.115134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.07E-6145188No hitNo description
SuperFamilySSF474593.4E-11145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-8145190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MAENGAFEGD HLAVTEGPGF SQLLFPADEV VNLAVDSDQT FNYTRPSTYP TQIKPPKILC  60
FGNYDQTHGN GVEIGFLETA KKSAAACSES SSVSSTGTAS INALPKSNNK RQRGSAPISS  120
TATPPIQTAA KRAKSENPTS AGNGKRKEKL GERITALQQL VSPYGKTDTA SVLHEAMGYI  180
RFLQEQVQVL CSPYLQRLPP LPVHGGEVKQ EGRRSELRSQ GLCLVPMEYT THAGNSNGAG  240
FWSPAMANIY DVSSPSTKY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr038570.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009345063.10.0PREDICTED: transcription factor bHLH113-like
TrEMBLA0A498J0U01e-165A0A498J0U0_MALDO; Uncharacterized protein
STRINGXP_009345063.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103212129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.15e-42bHLH family protein