PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr036287.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family SAP
Protein Properties Length: 470aa    MW: 51541.9 Da    PI: 6.5681
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr036287.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP735.73.9e-224134672454
          SAP   2 ssssssssseseegseggeggdass....gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqr 95 
                  sssssss s++++g++g +g + s+    g++egpsssr+ra+nevwpePf+eala+qva++asr++Grlaaa+alanvfqvcstwravs s+llw+r
  Pbr036287.1  13 SSSSSSSTSHDGNGDDGANGAGPSNvqrgGDFEGPSSSRRRAVNEVWPEPFVEALAAQVATEASRYVGRLAAAPALANVFQVCSTWRAVSLSELLWHR 110
                  56666666667777777777776668899********************************************************************* PP

          SAP  96 ltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdr 193
                  ltrriW rt l+rdtWr+eyiy+hrta+nfrtrr++++tl+fd +dv++   +d l+Crcl+lsd +la+GfadGavrlfdl+trlhvstf+p+ rdr
  Pbr036287.1 111 LTRRIWGRTILIRDTWRDEYIYWHRTAMNFRTRRSAHTTLDFDLSDVED---PDGLTCRCLTLSDAHLACGFADGAVRLFDLATRLHVSTFRPHLRDR 205
                  ********************************************98887...699******************************************* PP

          SAP 194 lGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPea 291
                  lGrfsrav+Givi+d +l+fatldGdihvavi+g     +rra+lGdvvndG+lvdf+Gs+rWwvGlyaGvpGr+fhiWd++te+l+fvGG+ltdPea
  Pbr036287.1 206 LGRFSRAVTGIVITDFKLTFATLDGDIHVAVING--PQVTRRAHLGDVVNDGVLVDFTGSERWWVGLYAGVPGRTFHIWDSSTEQLTFVGGTLTDPEA 301
                  **********************************..679*********************************************************** PP

          SAP 292 vmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrg 388
                  vmGWhmlte+te+vGrvrvt+retavaCts r++vfdl nqg+vl eee rrG+iv++ d+s +ay++v +rG a+vr  ++ eevcrf+vrg aq  
  Pbr036287.1 302 VMGWHMLTEMTESVGRVRVTSRETAVACTSARVIVFDLTNQGIVLSEEEYRRGIIVAAADVSRSAYIIVGRRGLASVRWNDTQEEVCRFNVRGaAQMA 399
                  *********************************************************************************************99*** PP

          SAP 389 vlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss...dgtihlldfga 454
                  v+gC+n g al++ ggv+rvWe e+ + ylys+rer+gevnalv d+rhva++s     + +hl+dfga
  Pbr036287.1 400 VMGCMNEGCALMCVGGVVRVWEAERGA-YLYSFRERIGEVNALVCDERHVAACSWgsgGTRLHLWDFGA 467
                  *************************77.*************************86544678*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.501.2E-586144No hitNo description
SuperFamilySSF813831.85E-787141IPR001810F-box domain
SuperFamilySSF509786.5E-12161364IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.101.2E-9166231IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.101.2E-9277464IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509786.5E-12405464IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MSTSYSSAPS STSSSSSSST SHDGNGDDGA NGAGPSNVQR GGDFEGPSSS RRRAVNEVWP  60
EPFVEALAAQ VATEASRYVG RLAAAPALAN VFQVCSTWRA VSLSELLWHR LTRRIWGRTI  120
LIRDTWRDEY IYWHRTAMNF RTRRSAHTTL DFDLSDVEDP DGLTCRCLTL SDAHLACGFA  180
DGAVRLFDLA TRLHVSTFRP HLRDRLGRFS RAVTGIVITD FKLTFATLDG DIHVAVINGP  240
QVTRRAHLGD VVNDGVLVDF TGSERWWVGL YAGVPGRTFH IWDSSTEQLT FVGGTLTDPE  300
AVMGWHMLTE MTESVGRVRV TSRETAVACT SARVIVFDLT NQGIVLSEEE YRRGIIVAAA  360
DVSRSAYIIV GRRGLASVRW NDTQEEVCRF NVRGAAQMAV MGCMNEGCAL MCVGGVVRVW  420
EAERGAYLYS FRERIGEVNA LVCDERHVAA CSWGSGGTRL HLWDFGAAD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr036287.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009343485.10.0PREDICTED: transcriptional regulator STERILE APETALA
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A498H9130.0A0A498H913_MALDO; Uncharacterized protein
STRINGXP_009343485.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]