PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr035863.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 446aa    MW: 49713.1 Da    PI: 7.4609
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr035863.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353e-11152192545
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Pbr035863.1 152 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQEL 192
                  7789************************8766666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.6E-9145194No hitNo description
SMARTSM003386.8E-9148220IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243150194IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.46E-7152195No hitNo description
CDDcd147081.02E-21152204No hitNo description
PfamPF001702.1E-8152192IPR004827Basic-leucine zipper domain
PROSITE patternPS000360155170IPR004827Basic-leucine zipper domain
PfamPF141445.3E-31243316IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MITRSSKDGE AAYDLGELDQ ALFLYLDGQS QDHHNPSVNH VHHQDQRHPH QNNSSSGMRP  60
PTLNIFPSQP MHVEPSSTEA AGTGLVSSSS SGSKRPSLPS MELANPRNDS TAPPPPSGPP  120
QQPAKAIKRE GNRKGPTTSS SEQEGPKTPD PKTLRRLAQN REAARKSRLR KKAYVQQLET  180
SRIKLTQLEQ ELQRARSQGM YFGGGLVGGE QQNLPVGINN ISSDAAVFDM EYARWLEEHH  240
RLMCELRAAV QEHLPENELR LFVDNCLAHY EEVLNLKGMV AKTDVFHIVS GMWKSPAERC  300
FMWMGGFRPS DVIKIILNQM EPLTDQQLLG ICGLQQSTQE TEEALSQGLE ALNQSLSETI  360
TSDSLSCPPN MANYMGHMAI AMNKLSTLEG FVRQADNLRQ QTIHRLQQIL TTRQAARCLL  420
AIAEYFHRLR ALSSLWMARP RQDQS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr035863.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009370244.20.0PREDICTED: transcription factor TGA2.3-like, partial
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A498HYB50.0A0A498HYB5_MALDO; Uncharacterized protein
STRINGXP_009370244.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein