PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr034761.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 445aa    MW: 49839.4 Da    PI: 6.8042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr034761.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-19203253256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Pbr034761.1 203 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 253
                  59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.92E-34202262No hitNo description
Gene3DG3DSA:3.30.730.102.9E-32203261IPR001471AP2/ERF domain
PROSITE profilePS5103222.998203260IPR001471AP2/ERF domain
SMARTSM003801.1E-39203266IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-23203261IPR016177DNA-binding domain
PRINTSPR003677.8E-11204215IPR001471AP2/ERF domain
PfamPF008472.6E-12204253IPR001471AP2/ERF domain
PRINTSPR003677.8E-11226242IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MSSPKKSGKS KMETSGEWEA NKDKELDFSF ERPPWKPGFS EASMASNRPL KKVKSPERQD  60
PIQSSASLAH QTPSPIIAPY PSSSSKIVFP FSFDGSQQPM MQFPHQFNPT NVPILPSPIQ  120
QQQQQNPQQM ISFESQQLQQ QQQHMSYPPP ATLSWQQHQQ ILQYWSDALN LSPRGRAMMM  180
NRLGPDGRPM FRAPAMPYNT TKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEDAA  240
MAYDREAFKL RGENARLNFP DLFLNKDKSD VPTSSAPSSA ATSPPTHESS KPTRRRKQPQ  300
KVKTSASNME AMPPPPVPHT QEENSTDNDS GLESSEAKAI DEVEANTDCA GGEGNSQQEE  360
IVWGDMAEAW LNAIPAGWGP GSPVWDDLDA NNNLLLQSHL PFTNPNQQDY NTNICPQQVL  420
HNSGSGSSSS SSYPVKNFFW KDQD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-20202260160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1292297TRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr034761.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ6698220.0JQ669822.1 Malus x domestica dehydration-responsive element-binding protein (DREB6) (DREB6-1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009342655.10.0PREDICTED: ethylene-responsive transcription factor ERF054-like
TrEMBLA0A498HD240.0A0A498HD24_MALDO; Uncharacterized protein
STRINGXP_009342655.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.16e-55ERF family protein