PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr034713.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 360aa    MW: 39738.9 Da    PI: 4.4288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr034713.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000583083471054
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  + R ++i++ ++ L+ ++P      ++  + + +L +A++Y+ksL
  Pbr034713.1 308 KMRKEKIRETINILQNIIPDG----KG-KDAIVVLDEAIQYLKSL 347
                  78999**************97....23.46699**********99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.334298347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-6308352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-6308351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MGEDFGAWIP HQYLGWQPPD PNAMGAQNGL GQQNFITAYG KPGTNMLLTN GTMPPYASSE  60
LPQPQVGRPN EPKGWFYCLP RIRQAFMPAT DNGLKERVSS ACHESTGGTF IPYTDSAFEQ  120
KRLLVNNPSG YQTTLVFSSE IVNPLQCRTS WNPYQQGAYY LDGDDPRNEG DFKNLSGAVL  180
TDEFKGNDEC GAESEMHEDT EELNALLYSD GDSDYTEDDE VTSTGHSPST MTVHDKQNWF  240
EEVASSDGMN KKRKLFDGGN DDVPSVMDTA SPMKHNRSLE LEDDAESSCA CNRSSGLREV  300
DSLSSNKKMR KEKIRETINI LQNIIPDGKG KDAIVVLDEA IQYLKSLKLK AKAFGLDSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr034713.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009342572.10.0PREDICTED: transcription factor bHLH145-like
TrEMBLA0A498HR140.0A0A498HR14_MALDO; Uncharacterized protein
STRINGXP_009342572.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF821946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-08bHLH family protein