PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr033315.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 295aa MW: 33887.7 Da PI: 6.7949 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 151.9 | 3e-47 | 19 | 145 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+ +yLk v gk+l++ ++i ++iy+++PwdLp k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s ++ Pbr033315.1 19 PGFRFHPTEEELLEFYLKSMVFGKRLRF-DIIGFLNIYHHDPWDLPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKIVSLsnPKR 115 9*************************99.99***************8778899*************************************99755677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +gl+ktLvfykgrap+g+ktdWvm+eyrl Pbr033315.1 116 IIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 145 7***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.23E-57 | 17 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.669 | 17 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.5E-25 | 19 | 145 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence Send to blast |
MAANTIDPDQ QMTPEFELPG FRFHPTEEEL LEFYLKSMVF GKRLRFDIIG FLNIYHHDPW 60 DLPGLSKIGE REWYFFVPRD RKHGSGGRPN RTTETGFWKA TGSDRKIVSL SNPKRIIGLR 120 KTLVFYKGRA PRGSKTDWVM NEYRLPDNCQ YLKDIVLCKI YRKATSLKVL EQMAAIEGDQ 180 IKNFHASPNS SPPPTSMDSI SFCSQALQED LTPQISTNHV VFKQEIEEAA LVIAQEQKDE 240 NAMEIKGSPP PPMYNLPELQ VPKYSMDWTQ DTVWTQMNSP WLQNLTPLAN ILNF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-47 | 19 | 163 | 17 | 168 | Stress-induced transcription factor NAC1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr033315.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009341552.1 | 0.0 | PREDICTED: protein FEZ | ||||
Swissprot | Q10S65 | 5e-95 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A498IZP0 | 0.0 | A0A498IZP0_MALDO; Uncharacterized protein | ||||
STRING | XP_009341552.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6214 | 32 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-117 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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