PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032206.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 266aa    MW: 28839.3 Da    PI: 5.9153
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032206.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57.1e-183888155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +++kGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  Pbr032206.1 38 KKFKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 88
                 59*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.40E-183898No hitNo description
SuperFamilySSF541712.62E-193997IPR016177DNA-binding domain
PROSITE profilePS5103221.4173996IPR001471AP2/ERF domain
PfamPF008477.2E-113988IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-293997IPR001471AP2/ERF domain
SMARTSM003807.3E-3539102IPR001471AP2/ERF domain
PRINTSPR003672.2E-84051IPR001471AP2/ERF domain
PRINTSPR003672.2E-86278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MVKTDQRIIQ LPSEMTSSKT TSKSPSSSSS SSTSACKKKF KGVRMRSWGS WVSEIRAPNQ  60
KTRIWLGSYS TAEAAARAYD AALLCLKGSS ANLNFPTTAS SHFIPQEMTV MSPKSIQRVA  120
XXXXXXXXXX XXXXXXXXXX XXXXAAAANN NAATTTANIA CPPSPPPQSS SSSSLVSSPS  180
LVSSPSTSSS PSINLIDDDM SLLMGSFGGS YTPTYYDQAN DQLPMSSMDS WNNFDQMFDG  240
ALLDPQPPMI YDFYEESDIR LWSFC*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032206.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018499426.11e-110PREDICTED: ethylene-responsive transcription factor ERF014-like
TrEMBLA0A498HYP31e-108A0A498HYP3_MALDO; Uncharacterized protein
STRINGXP_009340905.11e-108(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-33ERF family protein