PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030604.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 447aa    MW: 49783.2 Da    PI: 7.6955
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030604.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353e-11153193545
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Pbr030604.1 153 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQEL 193
                  7789************************8766666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.6E-9146195No hitNo description
SMARTSM003388.6E-9149221IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243151195IPR004827Basic-leucine zipper domain
PfamPF001702.1E-8153193IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-7153195No hitNo description
CDDcd147089.18E-22153205No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
PfamPF141441.6E-31244317IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MITRSNKDGG AAYDLGELDQ ALFLYLDGQS QDHHNPSANH IHHQDQRHLH QNNSSSGMRP  60
PTLNIFPSQP MHVEPSSSTK AAGTGLVSPS SSGSKRPSEP SMELANPRND STAPPPPSGP  120
SHEPAKAIKR EGNRKGPTTS SSEQEGPKTP DPKTLRRLAQ NREAARKSRL RKKAYVQQLE  180
TSRIKLTQLE QELQRARSQG MFFGGGLVGG EQQSLPVGIN NISPDAAVFD MEYARWLEEH  240
HRLMCELRAA VQEHLQENEL RLYVDNCLAH YDEVLNLKGM VAKTDVFHIV SGMWKTPAER  300
CFMWMGGFRP SEVIKIILNQ IEPLTEQQLL GICGLQQSTQ ETEEALSQGL EALNQSLSET  360
ITSDSLSCPP NMANYMGQMA IAMNKLSTLE GFVRQADNLR QQTIHRLQQI LTTRQAARCL  420
LAIAEYFHRL RALSSLWMGR PRQDQS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030604.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018503110.10.0PREDICTED: transcription factor TGA2.3-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A498HYB50.0A0A498HYB5_MALDO; Uncharacterized protein
STRINGXP_009357109.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein