PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030451.1
Common NameERF3
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 399aa    MW: 43122 Da    PI: 8.6833
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030451.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.7e-20169218255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  Pbr030451.1 169 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 218
                  7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.0E-37169232IPR001471AP2/ERF domain
CDDcd000187.36E-21169228No hitNo description
PROSITE profilePS5103225.712169226IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-22169227IPR016177DNA-binding domain
PfamPF008473.4E-14169218IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.9E-33169227IPR001471AP2/ERF domain
PRINTSPR003671.0E-11170181IPR001471AP2/ERF domain
PRINTSPR003671.0E-11192208IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MFLGYSRAAT EMSAMVSALT HVVSGQRGSD SWGHIGSGGV TSSFGQLFSS SFPSASPLSA  60
AFSSSASPAS NNWVGQKRGR EEDLDSASAL AQTQFMESGN RALRGGYSDY RGTQSDSPSG  120
GASATVTEES TKFSTAPTTA TVSVTTAVPT TPSSTESVSF EETGERKRRY RGVRQRPWGK  180
WAAEIRDPHK AARVWLGTFD TAEAAARAYD EAALRFRGNR AKLNFPENVR LVQPPPPPPP  240
TLQTFNSNSR PTQYAQPLQP PPLPQPPQQQ LYHSQQAFQP SSDLLRDYFD YSQLLQSSAD  300
FHPQQQQQQQ PSSLLQQMYY NSQLASLQSY ILQPASSTTP SSALPSSASS SASFPLFFSE  360
QNQQLGFFRQ PQNPNQGGSS DFQSPSWSHS GNNPSSSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22168229163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030451.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ6237170.0KJ623717.1 Pyrus x bretschneideri ethylene response factor 3 (ERF3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018499123.10.0PREDICTED: ethylene-responsive transcription factor ABR1-like
TrEMBLA0A286S6A50.0A0A286S6A5_9ROSA; ERF3
STRINGXP_008372740.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.15e-24ethylene response factor 110