PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr029616.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 76aa    MW: 8678.3 Da    PI: 11.157
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr029616.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.94.6e-282574251
      G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
                 prlrWt+ LHe Fveav++LGG+ kAtPk+il++m+vkgL ++hvkSHLQ
  Pbr029616.1 25 PRLRWTSHLHELFVEAVQSLGGKYKATPKRILQMMSVKGLEISHVKSHLQ 74
                 8************************************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.52175IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-242274IPR009057Homeodomain-like
SuperFamilySSF466893.14E-132574IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-212575IPR006447Myb domain, plants
PfamPF002492.4E-72674IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MSKKEIMKGS SHRIGVRKYH KSELPRLRWT SHLHELFVEA VQSLGGKYKA TPKRILQMMS  60
VKGLEISHVK SHLQV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-172674351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-172674351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-172674351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-172674351Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-172674452Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr029616.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009356593.15e-47PREDICTED: putative Myb family transcription factor At1g14600
SwissprotQ700D93e-20MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLA0A498J3D51e-40A0A498J3D5_MALDO; Uncharacterized protein
STRINGXP_009356593.12e-46(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.18e-24G2-like family protein