PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr027108.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 356aa    MW: 39491.3 Da    PI: 8.5702
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr027108.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.8e-08179226455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k    a +L + ++Y++sLq
  Pbr027108.1 179 SHSLAERVRREKISERMKMLQKLVPGC----DKVTGRAVMLDEIINYVQSLQ 226
                  8*************************9....55599***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.24E-15173239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.87E-10173230No hitNo description
PROSITE profilePS5088815.04175225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.3E-16176234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-5179226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-10181231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MAAFSYNGSL DSIFLPNAPA TNDIIIYSNF FSPSEPLTRE IQADNNSRAV ESSCTMDHSS  60
THKVAFSDNE NEPSVTKNKS TESSTVVDVD RLEIGEQVTQ KVTPMDKKRK SRIGSSFKSA  120
QSKGTQEHKG KKQKKIGGGT KKAEEKKIKS DKKDQVKVRE EPPTGYIHVR ARRGEATDSH  180
SLAERVRREK ISERMKMLQK LVPGCDKVTG RAVMLDEIIN YVQSLQNQVE FLSLKLASSN  240
PMFFDFGMDM GALVVKPERL CSMVSPYPSA QQCNPIQSTP FADTSTNITA TTVAATAAIT  300
TNNNYHFLDN SASHLLQRPK TFSQDSESLL WDVEDQRQNF HNPCGFSNSN LCSFN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr027108.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009337524.10.0PREDICTED: transcription factor bHLH137
RefseqXP_009337525.10.0PREDICTED: transcription factor bHLH137
TrEMBLA0A498I6N80.0A0A498I6N8_MALDO; Uncharacterized protein
STRINGXP_009337524.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.27e-53bHLH family protein