PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr025283.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 459aa    MW: 49730.4 Da    PI: 6.4552
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr025283.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.96.8e-16239295359
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                  ++kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L  e + L ++l   ++++++ 
  Pbr025283.1 239 DVKRARRMLSNRESARRSRRRKQAQMGELETQVGQLRVEHSGLLERLTDVNQKYDNA 295
                  68******************************************9999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.0E-11236292No hitNo description
SMARTSM003384.8E-18237301IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.68239293IPR004827Basic-leucine zipper domain
PfamPF001702.4E-13240293IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-11240292No hitNo description
PROSITE patternPS000360244259IPR004827Basic-leucine zipper domain
PfamPF124981.3E-26308431IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    Send to blast
MHSVFSADDS SDTFWALSPP AEMNRSASEW AFEQFLDEFA TPVATPRQSV AEQFPVSSAA  60
SCSVASQSST SKRDHVDEEV VEIKKPDRHR RRQLQPPQQL DHPSPPAALD PAPTAPINSD  120
QYREFLKNQL DLACAAVALS RASSLTPVDL GNLAENPSLV SKPSQLAPTR SLDKDAGNAL  180
PVPQNEADTS PLAVSALPAA QRRTPVLSKQ TTSGSSKEDS DDDDLEGDIE INENMDPSDV  240
KRARRMLSNR ESARRSRRRK QAQMGELETQ VGQLRVEHSG LLERLTDVNQ KYDNAAVDNR  300
ILRADIETLR AKVKMAEESV KRVTGINPLL LAMSNAANAG MPPVSNPMNV STNAAVPMQP  360
NSNQLFHPGV PSMTTTPLHH QRLETGFHAN SPISLVGNRQ GNAGQPVITG SNVAHNSSMP  420
HTGNIDHMPQ QQQPRPGVGE ALPGWDPQLP HAVPKNKK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253260RRSRRRKQ
2255260SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr025283.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018502674.10.0PREDICTED: light-inducible protein CPRF2-like isoform X1
TrEMBLA0A498JYX10.0A0A498JYX1_MALDO; Uncharacterized protein
STRINGXP_008372296.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.16e-51basic leucine zipper 25