PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr024740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | EIL | ||||||||
Protein Properties | Length: 615aa MW: 69440.6 Da PI: 4.893 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 466.2 | 2.2e-142 | 48 | 420 | 2 | 353 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 el++r wk +m+lkrlke++k e ++++++ +++eqarrk msraQDgiLkYMlk+mevc+a+GfvYgiipe+gkpv+gasdsLr+WWkekv Pbr024740.1 48 ELERRVWKYRMRLKRLKEQNKG----TEG-ADNARQCQPQEQARRKRMSRAQDGILKYMLKMMEVCKAKGFVYGIIPENGKPVTGASDSLRKWWKEKV 140 9********************8....445.5667789************************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.----- CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykk 197 +fd ngpaa+sky a++ i+++++++++ s++h+l+el D+tlgSLLsalmqhc ppqrrfplekgv+pPWWPtG+e+ww +l l kdqg+ppy+k Pbr024740.1 141 RFDHNGPAAVSKYLAEHPIPGKNEESHA-VPSTPHNLQELHDATLGSLLSALMQHCHPPQRRFPLEKGVAPPWWPTGNEEWWTQLNLRKDQGPPPYRK 237 *********************9999977.99******************************************************************* PP GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XXXXXXXXXXXXXXXXXXXXXX.XXXXXX CS EIN3 198 phdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ssslrkqspkvtlsceqkedve.gkkesk 291 phdlkkawkvsvL+avikhmsp+i++ir+l+ +skylqdkmsake+ ++l++lnqee+++++++++ ++s++ + ++ +s +++dve +++e++ Pbr024740.1 238 PHDLKKAWKVSVLAAVIKHMSPDIARIRKLVHRSKYLQDKMSAKETTIWLAILNQEENLAQRLYPDgctPPSSSGSGSSFAISGTSDYDVEvVDDEEN 335 ******************************************************************986557777899*************7666666 PP .XXXXXXXXXX..........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 292 ikhvqavktta..........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 ++ ++ + + + +krk+ p+e++++ +++ +tc+ +++++++l+f + +++++++ Pbr024740.1 336 YEEEDCQP--HfnhlnigtsgqrdglmhhfmaeltetDSDSGQKRKQLPEEPQMMLNHQ-GYTCEYLDCPYHDYHLGFRNITARNNHQ 420 55444444..235899***************************************9986.5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 6.5E-121 | 48 | 294 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.4E-69 | 169 | 303 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.7E-58 | 173 | 296 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 615 aa Download sequence Send to blast |
MAIIEELEFI EDLDFLLALP EEGEAAPEHD PEATVEEDDS DDELDVNELE RRVWKYRMRL 60 KRLKEQNKGT EGADNARQCQ PQEQARRKRM SRAQDGILKY MLKMMEVCKA KGFVYGIIPE 120 NGKPVTGASD SLRKWWKEKV RFDHNGPAAV SKYLAEHPIP GKNEESHAVP STPHNLQELH 180 DATLGSLLSA LMQHCHPPQR RFPLEKGVAP PWWPTGNEEW WTQLNLRKDQ GPPPYRKPHD 240 LKKAWKVSVL AAVIKHMSPD IARIRKLVHR SKYLQDKMSA KETTIWLAIL NQEENLAQRL 300 YPDGCTPPSS SGSGSSFAIS GTSDYDVEVV DDEENYEEED CQPHFNHLNI GTSGQRDGLM 360 HHFMAELTET DSDSGQKRKQ LPEEPQMMLN HQGYTCEYLD CPYHDYHLGF RNITARNNHQ 420 LTCSYRNNSS QVGMSSAHPN GDKLVGSLPS PQPNPAIQQP VNQTSSFNAS GLEPAGDEQN 480 MISEFMSFCD GNTQQNKNSD PGSLDVVENH NQHQVNYQFP MGDNFFDQRL VVGPNMSAAS 540 PMPMPMPMPM LPPATPAPPS LPSTEFQFDP CNLFDSPFGN LPDNTDNLGF GTNLPRDDYS 600 LDSMLEQDPF WMCR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-68 | 171 | 304 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-68 | 171 | 304 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr024740.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009355062.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A498KH51 | 0.0 | A0A498KH51_MALDO; Uncharacterized protein | ||||
STRING | XP_009355062.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 1e-160 | EIL family protein |