PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr022933.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bZIP | ||||||||
Protein Properties | Length: 246aa MW: 27175.3 Da PI: 7.4793 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.6 | 3.1e-09 | 88 | 133 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 r rr N+eA r++R++Kka ++ Le++vk+L+ N++L +l+ Pbr022933.1 88 PRRRRSSGNKEAVRKYREKKKAHTAYLEDEVKKLQVLNQQLVRKLQ 133 57788888*********************************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-6 | 80 | 151 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.0E-10 | 88 | 152 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-6 | 89 | 133 | No hit | No description |
CDD | cd14686 | 6.59E-11 | 89 | 133 | No hit | No description |
PROSITE profile | PS50217 | 8.588 | 89 | 133 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 5.3E-11 | 89 | 133 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MDDGEVVTSD HALLPNPNSS SNFHGSTYED TFFDEFLKTA RTCTHTHTCN PPGPEAAHTH 60 TCYHTHTQVL PSEDDDGTKN KEHSNLRPRR RRSSGNKEAV RKYREKKKAH TAYLEDEVKK 120 LQVLNQQLVR KLQGQAILEA ERLRLRGLLL ELRGKIDTEL GAFPFQKQCN SNTYFEDSQC 180 NLQSSVGAMG LRCQTDLPCF CPPVGSSVQA SIGARGETMV PSGGNCQPAV IDCRANTNEA 240 STQAK* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr022933.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009354399.1 | 0.0 | PREDICTED: basic leucine zipper 23 | ||||
TrEMBL | A0A498KIC0 | 1e-149 | A0A498KIC0_MALDO; Uncharacterized protein | ||||
STRING | XP_009354398.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2567 | 32 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 9e-38 | bZIP family protein |