PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr022507.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

VOZ

Protein Properties

Length: 465aa MW: 51391.3 Da PI: 5.7603

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr022507.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	399.8	6e-123	216	430	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pp saflgpkcalwdc+rpaq +qdycss ha la neglpg tpvlrp+gi lkdg+lfaal+ak+qgk+vgip+c+gaat +spwn +elf+l Pbr022507.1 216 PPVSAFLGPKCALWDCSRPAQV--LCQDYCSSGHALLARNEGLPGNTPVLRPGGIALKDGSLFAALNAKTQGKDVGIPNCDGAATLRSPWNDSELFHL 311 788***************97..6********************************************************************* PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 slleget+rewlff +prrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqpss +ewhl+eye+n++da+alyrlelk +kks+ Pbr022507.1 312 SLLEGETLREWLFFGRPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEYGGQKRSYYMDPQPSSDHEWHLFEYEVNNSDACALYRLELKFGTAKKSS 409 ********************************************************************************************** PP VOZ 197 kgkvskdsladlqkklgrlta 217 kgkvs+d+ladlqkk+grlta Pbr022507.1 410 KGKVSSDPLADLQKKMGRLTA 430 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence Send to blast
MLKDSKGKCE AASHKLLKEK AKTRVQELQG MVTNIQNARK EGRTADIAIW EDQMHQMLGG 60 WGAELNDPSP ASSLHGGSHG SLGSFSEELA RLLKQHCDEK DDAESPLKEL PQPKLEGPEP 120 NLQNPHSINF TEFTEDFFIS SKEPQEDIFQ GLDLDQCHTA SNFPNRVVNI PDLTTQMNDN 180 HFEFPDYLNE GPFISHNDIK QSEEDVVPNV MPDICPPVSA FLGPKCALWD CSRPAQVLCQ 240 DYCSSGHALL ARNEGLPGNT PVLRPGGIAL KDGSLFAALN AKTQGKDVGI PNCDGAATLR 300 SPWNDSELFH LSLLEGETLR EWLFFGRPRR AFESGNRKQR SLPDYSGRGW HESRKQVMKE 360 YGGQKRSYYM DPQPSSDHEW HLFEYEVNNS DACALYRLEL KFGTAKKSSK GKVSSDPLAD 420 LQKKMGRLTA EASTEVGNNS KGKAGKKADA GNIFGSDNQT TPTT*

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence Send to blast

MLKDSKGKCE AASHKLLKEK AKTRVQELQG MVTNIQNARK EGRTADIAIW EDQMHQMLGG  60
WGAELNDPSP ASSLHGGSHG SLGSFSEELA RLLKQHCDEK DDAESPLKEL PQPKLEGPEP  120
NLQNPHSINF TEFTEDFFIS SKEPQEDIFQ GLDLDQCHTA SNFPNRVVNI PDLTTQMNDN  180
HFEFPDYLNE GPFISHNDIK QSEEDVVPNV MPDICPPVSA FLGPKCALWD CSRPAQVLCQ  240
DYCSSGHALL ARNEGLPGNT PVLRPGGIAL KDGSLFAALN AKTQGKDVGI PNCDGAATLR  300
SPWNDSELFH LSLLEGETLR EWLFFGRPRR AFESGNRKQR SLPDYSGRGW HESRKQVMKE  360
YGGQKRSYYM DPQPSSDHEW HLFEYEVNNS DACALYRLEL KFGTAKKSSK GKVSSDPLAD  420
LQKKMGRLTA EASTEVGNNS KGKAGKKADA GNIFGSDNQT TPTT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr022507.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009354289.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-156	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	M5WU25	0.0	M5WU25_PRUPE; Uncharacterized protein
STRING	XP_009354289.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-151	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]