PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr022503.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 296aa    MW: 32793.4 Da    PI: 6.6766
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr022503.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31e-10188236553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  kr +r   NR +A+rsR RK++++ eLe+ v +L+ae + L  +++ l 
  Pbr022503.1 188 KRVKRILANRQSAQRSRVRKLQYVSELERSVNSLQAEVSVLSPRVSFLD 236
                  8999*********************************988877766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.8E-15184248IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.726186238IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.6E-13188239No hitNo description
SuperFamilySSF579592.19E-11188242No hitNo description
PfamPF001704.0E-9188235IPR004827Basic-leucine zipper domain
CDDcd147036.57E-24189239No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MAQLPPKVPS MTPNWPDISH QKMPPSMGGC FAPNGNATNA TTSQNPCWVD EFLDFSSVRR  60
GSHRRSVSDS TTFLEAPMQE ECRVSVAPPG SHSHANNNHE FDRFDDEQFM SMFTTDEISA  120
AAATVGPTGS SSNPSTPSDH NSINDDEKET QGINKQQQIN KQLKNEFEEG ESQCELQTTS  180
NGRKIDPKRV KRILANRQSA QRSRVRKLQY VSELERSVNS LQAEVSVLSP RVSFLDHQRL  240
LLNVDNSALK QRIAALAQDN IFKDESQFHP IAGSNANSLR HILHQQSLLL VLATS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr022503.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0969003e-52BT096900.1 Soybean clone JCVI-FLGm-25J24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009354285.10.0PREDICTED: basic leucine zipper 34-like
SwissprotQ9M2K43e-95BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A498HII30.0A0A498HII3_MALDO; Uncharacterized protein
STRINGXP_009354285.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.13e-75bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]