PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr021976.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 361aa    MW: 40282.4 Da    PI: 4.9869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr021976.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-102853251055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++ +L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Pbr021976.1 285 RKRRERINERLRTLQHLVPNG-----TKVDISTMLEEAVHYVKFLQ 325
                  9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-14274341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.218275324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-12280336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-11281330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.16E-12284329No hitNo description
PfamPF000108.0E-8285325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MESVGVFADG EWESLSRLFT SEEVEFTPHF LSQGNSFPFQ HNEGMGFETR ESFYPNIPGA  60
ETFFHHPSSE SPNSNVDYLS SQESCNYGDH NHGIFTTILN QENCYFSNSC NFPVSNIDVS  120
ESMDVYMNRD GKSFASFVPA FSDIVMHGSE CNKEDSGSDS QPAIVPVPEK ELQLKRVHDA  180
PEKSSNDTSD SDPKKKPRLS KDVEKSKKNN VRSKKGQKGN SDVKFKDEEE RLQSTSSCTS  240
EGDNGSLEIN GGETSDPKAS STLNLNGKTR ANRGSATDPQ SLYARKRRER INERLRTLQH  300
LVPNGTKVDI STMLEEAVHY VKFLQLQIKL LSSDDMWMYA PIAYNGMDIA LDLQKLSPLL  360
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr021976.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009354101.10.0PREDICTED: transcription factor bHLH85
TrEMBLA0A498JE080.0A0A498JE08_MALDO; Uncharacterized protein
STRINGXP_009354101.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-48bHLH family protein