PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr020210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bZIP | ||||||||
Protein Properties | Length: 155aa MW: 17698.9 Da PI: 8.9498 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.5 | 3.4e-14 | 52 | 110 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NR +ArrsR RKk++ieeL v++L + N++L ++l +l + ++ +e+ Pbr020210.1 52 RKLKRMISNRKSARRSRMRKKKQIEELHYQVDQLHSTNRQLSEKLIQLLEGNQQILQEN 110 5789********************************************99999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-11 | 45 | 112 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.231 | 50 | 113 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-12 | 52 | 110 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.74E-11 | 52 | 103 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.6E-12 | 52 | 108 | No hit | No description |
CDD | cd14702 | 1.63E-14 | 53 | 101 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 55 | 70 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MELNESMPIY PTRFFPISHI HVPNPDFSAN TSSLGNEAAF DEAGQQDMNY KRKLKRMISN 60 RKSARRSRMR KKKQIEELHY QVDQLHSTNR QLSEKLIQLL EGNQQILQEN AQLKERVSSL 120 QIIHADLITP LRIEGDVTVN TNGNQLTAED SSTP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 50 | 72 | KRKLKRMISNRKSARRSRMRKKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr020210.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009348038.2 | 1e-111 | PREDICTED: basic leucine zipper 43-like | ||||
TrEMBL | A0A498JSG0 | 1e-88 | A0A498JSG0_MALDO; Uncharacterized protein | ||||
STRING | XP_009348038.1 | 1e-106 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13044 | 24 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 9e-21 | basic leucine-zipper 70 |