PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019740.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 358aa    MW: 39966.3 Da    PI: 5.2974
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019740.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.2e-092823221055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++ +L+ l+P+      +K++ +++Le++v+Y+k Lq
  Pbr019740.1 282 RKRRERINERLRTLQHLVPNG-----TKVDISTMLEEVVHYVKFLQ 322
                  9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.33E-13271336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.799272321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-11277331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-10278327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.22E-11281326No hitNo description
PfamPF000105.9E-7282322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MESDGVFADG EWESLSRLFS SEEVEFTPHF LSQGNSFPFQ HNEGMGFETL ETFYPNIPGV  60
ETFSHLPSSD SPNSNVHLSS HESCNYGDNY HGNFTAMLNQ ENCYFRNSCN FLMSNIDVSE  120
SMDVYMNHDD KSFASFVPAF SNIVMHGSEC NKEDSSSDSQ PAVVSVPEKE LQLKRVHDAP  180
GKSNNDASKC KKKPRISKDV EKSKKNNVRS KKGQKGNSDV KVKDKEERLE STSSCTSEDD  240
NGSLEIDGAE TSDPKSSSAL NLNGKTRANR GSATDPQSLY ARKRRERINE RLRTLQHLVP  300
NGTKVDISTM LEEVVHYVKF LQLQIKLLGS DDMWMYAPIA YNGMDIGLDL QKLSPLL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019740.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009360553.10.0PREDICTED: transcription factor bHLH85
TrEMBLA0A498HTP70.0A0A498HTP7_MALDO; Uncharacterized protein
STRINGXP_009360553.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-48bHLH family protein