PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr016725.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 513aa    MW: 56703.1 Da    PI: 5.8284
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr016725.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.91.2e-15302350154
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +r++h + Er+RR+++N +f+ L+ l+P++     +K++ a+i+  A+eYI++L
  Pbr016725.1 302 KRTKHFATERQRRQQLNGKFDILKNLVPNP-----TKNDRASIVGDAIEYINEL 350
                  79****************************.....9***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.063301350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-14302359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-13302350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-16302369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.71E-14302355No hitNo description
SMARTSM003536.3E-12307356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MYQDTVACNF DPNSIPESAA ESVLDLNPLP PQPPPQQPPQ VLMPSSDTTH HHNTTTPGFG  60
VEANIRLSME EPSYHPHHHQ YHHSSMEIEL QNELGFSVDN SYTTNTDHNN NINNSHLVSF  120
EHPTNWDTTN IQGVHDQMQQ QFPDGTTSAT CTLYPQPPDL LNLFSLPRCS PSSLLQNSSI  180
TFTNPLPKTS NFPSSFGLLG DLPSAVDTPQ GTPSSVLYDP LLHLNLPPQP PLFRELLQSL  240
PHGYTLPGSG NGSLFGSGGD DREGSGGGVL YDPDGSLGRQ FDSGVLKFSR DMASNGIGRD  300
LKRTKHFATE RQRRQQLNGK FDILKNLVPN PTKNDRASIV GDAIEYINEL LRTVEELKLL  360
VEKKRCGRER IKRHKTEHDG AAAAADDESC NIQPLGEPHD QSYNNGSLRS SWLQRKSKDT  420
EVDIRIIDDE VTIKLVQRKK INLLLFVSRL LDELQLDLHH VAGGHIGNSY SFFFNTKMYE  480
GSCLYASAIA GKLIEVLDGQ YAAAVLPPTN SY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301313KRTKHFATERQRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr016725.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009373855.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_009373874.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA0A498KEK30.0A0A498KEK3_MALDO; Uncharacterized protein
STRINGXP_009373855.10.0(Pyrus x bretschneideri)
STRINGXP_009373874.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.14e-78bHLH family protein