PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr016302.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 428aa    MW: 45914.9 Da    PI: 7.4666
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr016302.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.11.4e-21324386163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+e kr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l se+
  Pbr016302.1 324 EREMKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENNTLRSEVNRIRSEYEQLLSEN 386
                  799*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077779.7E-31198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.1E-53137271No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-16319383No hitNo description
SMARTSM003382.6E-21324388IPR004827Basic-leucine zipper domain
PfamPF001702.0E-20324386IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.334326389IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-11327383No hitNo description
CDDcd147022.08E-23329379No hitNo description
PROSITE patternPS000360331346IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MGSREMDKPA KEKEKETKTT PATSQEQPAT TSTGTVNPDW SGFQAYSPIP PHGFMASSPQ  60
AHPYMWGVQH IMPPYGTPPH PYVAMYPHGG LYAHPSMPPG SYPFSPFAMP TPNGIVEASG  120
NTPGSMEADG KPSEVKEKLP IKRSKGSLGS LNMITGKNNE LGKTSGASAN GVYSKSAESA  180
SDGTSEGSDA NSQSDSQLKS GGRQDSLEGD VSQNGSSAHG SQNGAPHTML NQAMAIMPIT  240
AAGAPGAVPG PATNLNIGMD YWGAPPSAAM PAMHGKIPTT PVSXXXXXXX XXXXXXXXXX  300
XXXAGIVTAG SRDSVQSQIR LQDEREMKRQ RRKQSNRESA RRSRLRKQAE CDELAQRAEV  360
LKEENNTLRS EVNRIRSEYE QLLSENASLK ERLGEIPGRE DIRSARSEPH LSNDTKQNAQ  420
TEQHGGH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1340346RRSRLRK
2340347RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr016302.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC9518770.0KC951877.1 Pyrus pyrifolia bZIP protein (bZIP) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009373463.10.0PREDICTED: bZIP transcription factor 16-like
RefseqXP_009373464.10.0PREDICTED: bZIP transcription factor 16-like
SwissprotQ501B21e-170BZP16_ARATH; bZIP transcription factor 16
TrEMBLD9ZIQ90.0D9ZIQ9_MALDO; BZIP domain class transcription factor
STRINGXP_009373463.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-162basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]