PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr015427.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 455aa    MW: 51739.6 Da    PI: 4.504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr015427.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.53.2e-2481392128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  p+G++FhP+d+elv +yL +k +g++++ e+vi+e+d+y + e +d+ +    +  ++++++yfF+k + ++ tg+r  r++ sg+Wk      +v++
  Pbr015427.1   8 PVGYKFHPRDDELVGYYLYNKFRGTPFRDENVIPEIDLYGSmEARDIWNnnggQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAKVKD 105
                  89**************************999*******965499999633444333467799**************************9999999998 PP

          NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++e++g  k   + + + p+ e+  W+mhe++l
  Pbr015427.1 106 PkTKETIGFFKRYQYKNTKYPQ-ESGCWIMHEFSL 139
                  7577789999999999888887.7999******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-275166IPR003441NAC domain
PROSITE profilePS5100529.4637168IPR003441NAC domain
PfamPF023654.2E-178139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MAHSDTFPVG YKFHPRDDEL VGYYLYNKFR GTPFRDENVI PEIDLYGSME ARDIWNNNGG  60
QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AKVKDPKTKE TIGFFKRYQY  120
KNTKYPQESG CWIMHEFSLH PKQVMRINSS PSSRPNDAEY VVCRVRENFD RKRKADDHEE  180
TGVVQSQSKR IRMQSENIDE SYVTPMSSEV NSDHYNQQEQ EQTNINATST SSSISVTNVD  240
QRHYNYCEPE QYSEVINQYD IPQQQEQATA TSDPLNVTNL RLAEQQHNFV TQDPTVASSS  300
LAMAGPDNQE QQVQSNVTDL PQYYYDTKEP MTTMATLDTY VCLPELNFVV DPAGLFTRYY  360
YSSTQDPSSG TVSSQYDPPQ STATTGFANQ PHYFVTQDHQ PDYVVADPTV ASSLASPSNL  420
DQNHHIMDQD QLPPLTFDYT PGDIMIDLDD LWNN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr015427.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498IL630.0A0A498IL63_MALDO; Uncharacterized protein
STRINGXP_009372720.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.29e-18NAC domain containing protein 38