PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr014249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 290aa MW: 32800.6 Da PI: 4.6455 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49.6 | 1.3e-15 | 17 | 146 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 p GfrF+Ptd+elv +yL ++v + + + ++++e+d ++ePw + +++ + ++++y F + + ++ +r + + g+W+++ k+ Pbr014249.1 17 PLGFRFRPTDQELVGFYLSNRVIAGEqfmAYCRSFVHEFDpFGETEPWVIWENFGGrslVDQDLYLFYELHYL--PSSYIKRtIDAGGTWSQSS-YKT 111 89*****************99766664643344569***735689*****75333322255688988887654..34555662556899*9765.589 PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v++ +g+ +g k+ + + ++ + + W+++ey l Pbr014249.1 112 VKDFDGKSIGDKRCFKYK--NEGCEQDCGWLLEEYIL 146 9999************98..4445579********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.18E-17 | 13 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.171 | 16 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-13 | 17 | 145 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MANFYGNGLV RSYGDVPLGF RFRPTDQELV GFYLSNRVIA GEQFMAYCRS FVHEFDPFGE 60 TEPWVIWENF GGRSLVDQDL YLFYELHYLP SSYIKRTIDA GGTWSQSSYK TVKDFDGKSI 120 GDKRCFKYKN EGCEQDCGWL LEEYILNQTQ EIVDGNGSDH KSRKVVLCRL KKNPRCANKT 180 DRPTQELKEK PENKRARISS SLVHFDERNK KISGTNQDQE CKSGIDLNAM PPDFSDHDCL 240 TTTSGVCSCP ICLDGGGGEP LLEDEDDEDS LKDVDLSLGP KVLPQFDET* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr014249.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009371544.1 | 0.0 | PREDICTED: NAC transcription factor 29-like | ||||
TrEMBL | A0A498IRZ7 | 7e-99 | A0A498IRZ7_MALDO; Uncharacterized protein | ||||
STRING | XP_009371544.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 6e-09 | NAC family protein |