PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr009262.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 349aa    MW: 37954.1 Da    PI: 5.2715
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr009262.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.51.9e-15179227354
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  ++kr rrk +NRe+ArrsR+RK+a ++ Le  v++L +eN++L     +l++
  Pbr009262.1 179 DIKRIRRKVSNRESARRSRRRKQAHLADLELQVEQLRGENSTLH---RQLTD 227
                  58*****************************************9...45544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-14177241IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.162179225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11179218No hitNo description
PfamPF001701.1E-12180225IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-11181231No hitNo description
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.104.2E-4219252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MEQKPRYHVE VYSQTASSPL ELKRSPSEVC LGEALEYLLE KPMIGQEAAD TQGHRDEKFG  60
ELRARDRSFA DADVFFGDVC AGDHSFAFQN RDIMNGFSSS QLTETLLCTQ NLTPKNSCIS  120
AAMDSQSSIC VGSPTSAAKP IGGDNQTRGA YSGSSGEQSD EDDFEIEVSP CGDGTEPLDI  180
KRIRRKVSNR ESARRSRRRK QAHLADLELQ VEQLRGENST LHRQLTDAFQ QFRDADTNNR  240
VMKSDVEALR AKVKLAEDMV ARGSMTSGFN QILQGHLGTQ PLNPQNLRGV AAHVSPTITI  300
HGEDAPYAGI AVSGQNASFG LGNAGMANSN LSNRMMSDTV SCVSDLWS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183199RRKVSNRESARRSRRRK
2193200RRSRRRKQ
3195200SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr009262.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009367951.10.0PREDICTED: basic leucine zipper 9-like
SwissprotQ9FUD38e-68BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A498HSR80.0A0A498HSR8_MALDO; Uncharacterized protein
STRINGXP_009367951.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-54basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]