PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr009074.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 349aa    MW: 38072.2 Da    PI: 10.7056
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr009074.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.16e-16106162359
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                  ++kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L  e + L k+l   ++++++ 
  Pbr009074.1 106 DVKRARRMLSNRESARRSRRRKQAQMSELETQVGQLRVEHSGLLKRLTDVNQKYDNA 162
                  68********************************************99999998865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-18104168IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887106160IPR004827Basic-leucine zipper domain
PfamPF001701.8E-13107160IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-11107159No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-10108159No hitNo description
PROSITE patternPS000360111126IPR004827Basic-leucine zipper domain
PfamPF124981.4E-27175298IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MVKKGRPRAS SLTPVDLVNL AENQSPVSKP SQLAPTRSLD KDSGNGLPVT QNEADASPLG  60
VSALPAAQRR TPVLSKQTTS GSSKEDSDDD DLEGDIEINE NMGPSDVKRA RRMLSNRESA  120
RRSRRRKQAQ MSELETQVGQ LRVEHSGLLK RLTDVNQKYD NAAVDNRILR ADIETLRAKV  180
KMAEESVKRV TGINPLLLAM SNVANAGMPS VNNPMNASTN AAVPMQPNSN HLFHPGVPSM  240
TTTPLHHQRL DTGFHANPPI SLVRNRQSNV GQPVVPGSNM TQNSSIPHTG NIDHMPQQQP  300
QPQQQQQQPR PQQPXXXXXX XXXXXXXXXX XXXXXXPRDA APATARSG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120127RRSRRRKQ
2122127SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr009074.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008382956.11e-174light-inducible protein CPRF2-like isoform X1
RefseqXP_028965833.11e-174light-inducible protein CPRF2-like isoform X3
RefseqXP_028965834.11e-174light-inducible protein CPRF2-like isoform X4
TrEMBLA0A498IXU71e-172A0A498IXU7_MALDO; Uncharacterized protein
STRINGXP_009367785.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.14e-44basic leucine zipper 25