PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr007793.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 433aa    MW: 48508.2 Da    PI: 6.0298
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr007793.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.36.8e-14204255155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++++k+L+
  Pbr007793.1 204 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 255
                  79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.66E-16194266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.18E-13202259No hitNo description
PROSITE profilePS5088815.777203254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-14204268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-11204255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-11209260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MERLVQGPIN PCQSFGEHLD FQLEQSLNFT TESLSFEEEE ESHHHLLMPS LEDRMPFLQM  60
LQSVNSSTTT TPYFPLKEPS FQTLLKLQHF KKPWELDETY MPEMETTIQR APELESCVTH  120
EMVELQHSPV KSEGKDFHLQ HSISECNQGE EKPSSAAGSP PSPTWVQVHN GAEETQQSKS  180
PATRERRKRK RTRPTKNKEE VESQRMTHIA VERNRRRQMN DHLNVLRSLM PTSYIQRGDQ  240
ASIVGGAIDF VKELEQLLHS LEAQKRNRKT ADQIQGMNNN GNNNSSFSSS PASSSSPCSM  300
AMPSNGMFMT LSQCRIGSHD QEGTTAIATA ATAFEDEGTA QNKSEAADID VTVIQSHVNL  360
KVQCQRRAGQ LMKAILALED LRLTVLHLNI TSSQDTVLYS FNLKIDEGCH LGSADDIARA  420
VHQIFSFING SS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190RRKRKR
2204215RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr007793.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009366589.10.0PREDICTED: transcription factor bHLH57-like isoform X1
TrEMBLA0A498JH170.0A0A498JH17_MALDO; Uncharacterized protein
STRINGXP_009366589.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.12e-71bHLH family protein