PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr007163.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 213aa MW: 24349.9 Da PI: 8.25

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr007163.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.2	1e-14	72	123	6	57
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + +r+++NRe+ArrsR RKk++ieeL+ v++L + N+ L ++l +l + + Pbr007163.1 72 KLKRMISNRESARRSRMRKKKQIEELQYQVDQLHSTNRGLSDKLIQLLEGNQ 123 789**************************************99988876655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.4E-14	64	131	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.266	69	118	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.0E-12	69	123	No hit	No description
Pfam	PF00170	6.5E-13	71	129	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.63E-12	71	120	No hit	No description
CDD	cd14702	2.40E-16	72	120	No hit	No description
PROSITE pattern	PS00036	0	74	89	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence Send to blast
MEPNESKGTR YLPNHCLPNH PHPDSMPIYP PRFFPISHIH VPAHDFSPNA SSLSNEAAFD 60 EAGEPDMNYE RKLKRMISNR ESARRSRMRK KKQIEELQYQ VDQLHSTNRG LSDKLIQLLE 120 GNQLILQENA QLKERVSSLQ IVLADLITPL RNAGXXXXXX XXXXXXXXXG MPEKSLVTQV 180 AIDLEPKTQV RHDCLPPYYR EFRFASSSIG VQ*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr007163.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009339530.1	1e-110	PREDICTED: basic leucine zipper 43, partial
TrEMBL	M5WVR4	2e-77	M5WVR4_PRUPE; Uncharacterized protein
STRING	XP_009339530.1	1e-109	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13044	24	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	8e-33	basic leucine-zipper 70