PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr000422.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

VOZ

Protein Properties

Length: 484aa MW: 53896.3 Da PI: 6.1507

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr000422.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	438.5	8.7e-135	207	423	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pppsaflgpkcalwdc+rpaqg++w+ dycssfha+lalneg+pg+ pvlrp+gi+lkdgllfaalsak+qgk vgipecegaatakspwna+e+fdl Pbr000422.1 207 PPPSAFLGPKCALWDCPRPAQGFDWWLDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKGVGIPECEGAATAKSPWNAPEFFDL 304 89********************************************************************************************** PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 s+lege irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelklvd+kk++ Pbr000422.1 305 SVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKNS 402 ********************************************************************************************** PP VOZ 197 kgkvskdsladlqkklgrlta 217 k+k+++ds+adlqk++grl+a Pbr000422.1 403 KSKLTNDSVADLQKQMGRLSA 423 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence Send to blast
MKGSKSTCKS ASHKLFKDKA KNRVDDLQGM FTDLQFARKE SRSIDAALLE EQVHQMLREW 60 KAELNEPSSA SSFQQQGGSL GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PNDQNLQVGE 120 SLAFHEGFSV NQGQQEHAFP MADQCKSSPS GVRNAVNNLE GANQLDYHQF ELHQDFEQSF 180 YPCFHGTALR GEDTLSQAST YLPSIFPPPS AFLGPKCALW DCPRPAQGFD WWLDYCSSFH 240 AALALNEGPP GMGPVLRPGG IGLKDGLLFA ALSAKAQGKG VGIPECEGAA TAKSPWNAPE 300 FFDLSVLEGE IIREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQV MNEFGGLKRS 360 YYMDPQPLNH FEWHLYEYEI NKCDACALYR LELKLVDGKK NSKSKLTNDS VADLQKQMGR 420 LSAEFPSDNK RTVKGRAKVN AKVSVGNVYY APNRGATTNG TFDYEIGAPY DYLVDNVNGY 480 YRT*

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence Send to blast

MKGSKSTCKS ASHKLFKDKA KNRVDDLQGM FTDLQFARKE SRSIDAALLE EQVHQMLREW  60
KAELNEPSSA SSFQQQGGSL GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PNDQNLQVGE  120
SLAFHEGFSV NQGQQEHAFP MADQCKSSPS GVRNAVNNLE GANQLDYHQF ELHQDFEQSF  180
YPCFHGTALR GEDTLSQAST YLPSIFPPPS AFLGPKCALW DCPRPAQGFD WWLDYCSSFH  240
AALALNEGPP GMGPVLRPGG IGLKDGLLFA ALSAKAQGKG VGIPECEGAA TAKSPWNAPE  300
FFDLSVLEGE IIREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQV MNEFGGLKRS  360
YYMDPQPLNH FEWHLYEYEI NKCDACALYR LELKLVDGKK NSKSKLTNDS VADLQKQMGR  420
LSAEFPSDNK RTVKGRAKVN AKVSVGNVYY APNRGATTNG TFDYEIGAPY DYLVDNVNGY  480
YRT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr000422.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB531023	0.0	AB531023.1 Malus x domestica MdVOZ1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009345325.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_009345391.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_009345457.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A498JVE7	0.0	A0A498JVE7_MALDO; Uncharacterized protein
STRING	XP_009345325.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]