PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01184g00142.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 330aa    MW: 35558.3 Da    PI: 6.9575
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01184g00142.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-1854104155
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                               + y+GVr++  +g+WvAeIr+p+   k  r++lg+f ta +Aa a+++a+ +++g
  Peaxi162Scf01184g00142.1  54 CNYRGVRQRT-WGKWVAEIREPN---KGSRIWLGTFSTALDAALAYDEAAVSMYG 104
                               56*****999.**********93...25**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.8E-1254104IPR001471AP2/ERF domain
CDDcd000182.17E-3154113No hitNo description
Gene3DG3DSA:3.30.730.103.8E-3155113IPR001471AP2/ERF domain
PROSITE profilePS5103221.50955112IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-2055112IPR016177DNA-binding domain
SMARTSM003801.2E-3555118IPR001471AP2/ERF domain
PRINTSPR003671.0E-95667IPR001471AP2/ERF domain
PRINTSPR003671.0E-97894IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010286Biological Processheat acclimation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MSSRNLGELL ARWKAQNASI DSIADGSKPV RKAPSKGSRK GCMKGKGGPD NQHCNYRGVR  60
QRTWGKWVAE IREPNKGSRI WLGTFSTALD AALAYDEAAV SMYGSRACLN LPNYNCPNGS  120
SNNPSSEPTN LDSSSTITST HSEMTMDVQY GEKGSSSTSG YCIESKNVAT PGEEASMEGS  180
LLGNVIETPA GKKKCDNELN ADIATCIVDE MVNKLPVRRG CMVVKGGDEN PHCNYRDPGH  240
RTSDEWVAQK QELTIGSKNG SSSPNNGLEG ALPNDEEAKN VCGSFTKFNL QKYNITQDSS  300
NSSYFGPATS RSESGMISSC DEIHADRNVK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-2255112260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009776426.12e-67PREDICTED: uncharacterized protein LOC104226206
RefseqXP_016447448.12e-67PREDICTED: dehydration-responsive element-binding protein 2B-like isoform X1
RefseqXP_016447456.12e-67PREDICTED: uncharacterized protein LOC107772453 isoform X2
RefseqXP_016447462.12e-67PREDICTED: dehydration-responsive element-binding protein 2B-like isoform X3
TrEMBLA0A1S3Y5C14e-66A0A1S3Y5C1_TOBAC; dehydration-responsive element-binding protein 2B-like isoform X1
TrEMBLA0A1S3Y5L64e-66A0A1S3Y5L6_TOBAC; uncharacterized protein LOC107772453 isoform X2
TrEMBLA0A1S3Y6D14e-66A0A1S3Y6D1_TOBAC; dehydration-responsive element-binding protein 2B-like isoform X3
TrEMBLA0A1U7WGP04e-66A0A1U7WGP0_NICSY; uncharacterized protein LOC104226206
STRINGXP_009776426.16e-67(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.19e-37ERF family protein