PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01161g00122.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 390aa    MW: 43052.9 Da    PI: 6.6519
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01161g00122.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-10233281355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Peaxi162Scf01161g00122.1 233 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 281
                               58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.83E-11228285No hitNo description
SuperFamilySSF474595.23E-17228298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-16230298IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.472230280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-7233281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-10236286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MGSKENGDMR LQQRVGDTSF RADSMSNVDP FSSSGWDPLL SLNQKESFKG SSSVVGHNEF  60
ANLPYSSSHF VHYPSDPNLV DMVPKIPSFG NESYSELVNN SFPLHEQQLR GSSCYPNYVK  120
NRGIPTEGTF TKGPHSQEEC QISGEGVVEA SPNGKRKISE NHSLSNASKN VEGELPKDPS  180
RDSSECSKDQ DGKRYKIDRS KQAGKQVKED SDGGEAPKDN YVHVRAKRGQ ATNSHSLAER  240
VRRERISERM RLLQELVPGC NKITGKAVML DEIINYVQSL QQQVEFLSMK LATVNPELNF  300
DIDRILSKEM LHQQTSNAAL LGLGPGMNSS LPFPGISHGS FTGIPGTTPP FHTLPQNVWD  360
NELQGLLQMG FDSNTSMNNM GPHGRSKLDL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU9157223e-71CU915722.3 S.lycopersicum DNA sequence from clone LE_HBa-128L9 on chromosome 4, complete sequence.
GenBankHG9754433e-71HG975443.1 Solanum pennellii chromosome ch04, complete genome.
GenBankHG9755163e-71HG975516.1 Solanum lycopersicum chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019262623.10.0PREDICTED: transcription factor bHLH74 isoform X2
TrEMBLA0A314L7E00.0A0A314L7E0_NICAT; Transcription factor bhlh74
STRINGXP_009590631.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52502435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-71bHLH family protein