PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01105g00218.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 541aa    MW: 60531.3 Da    PI: 4.4334
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01105g00218.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.31.7e-54101391128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               l+pGfrFhPtdeelv +yL++k++g+++++e  i+e+diykvePwdLp  +++++++ ewyfFs  dkky +g r+nrat++gyW
  Peaxi162Scf01105g00218.1  10 LAPGFRFHPTDEELVRYYLRRKISGRPFKFEPPISEIDIYKVEPWDLPgmSRLRTRDLEWYFFSFLDKKYGNGARTNRATEKGYW 94 
                               579***************************888***************5337777888*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               k+tgkd++v+++k+++vg+kktLv+++grapkg++t+Wvmheyrl
  Peaxi162Scf01105g00218.1  95 KTTGKDRAVFRSKSQVVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 139
                               *******************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-618162IPR003441NAC domain
PROSITE profilePS5100558.43210162IPR003441NAC domain
PfamPF023653.4E-2812139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MESRGSSNLL APGFRFHPTD EELVRYYLRR KISGRPFKFE PPISEIDIYK VEPWDLPGMS  60
RLRTRDLEWY FFSFLDKKYG NGARTNRATE KGYWKTTGKD RAVFRSKSQV VGMKKTLVYH  120
SGRAPKGQRT NWVMHEYRLI DEELGRAGIP QDAFVVCRVF QKSGAGPKNG EQYGAPFIEE  180
EWEDDELQVL PKGEAAEEFE FSDDICLDGN DLDQILGTVT AVDGAPLPLD SYYGENGSSE  240
ESNNSSNAQN WLHQPDEQKS IDLAVHQNVD VIPGMHEYIG ESSKNVNSED VDYLLTEPII  300
NATDDLQSIN EAFLEANDLS NPIETDTSSI DMLDEYLAFF DANDNFENMG FDSSFLIGDN  360
DQIYDQALSS MKSIGEVTQQ VTPPNQGLGE YGNNFVSSSK LEPTKFGSDH QLPFMKQASQ  420
MLGNIHAPPA FAAEFPTKDA TLHLNSLSDS SRSVHVTAGL IIRDMTEGGN GTGWPSGKRG  480
DYNIILSFGL SRGIDDSSVE SFYSIHPGKP TSIMSRGWFY YLFLCILMFS MSLRIGSIIC  540
A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-441016817171NO APICAL MERISTEM PROTEIN
1ut4_B6e-441016817171NO APICAL MERISTEM PROTEIN
1ut7_A6e-441016817171NO APICAL MERISTEM PROTEIN
1ut7_B6e-441016817171NO APICAL MERISTEM PROTEIN
3swm_A6e-441016820174NAC domain-containing protein 19
3swm_B6e-441016820174NAC domain-containing protein 19
3swm_C6e-441016820174NAC domain-containing protein 19
3swm_D6e-441016820174NAC domain-containing protein 19
3swp_A6e-441016820174NAC domain-containing protein 19
3swp_B6e-441016820174NAC domain-containing protein 19
3swp_C6e-441016820174NAC domain-containing protein 19
3swp_D6e-441016820174NAC domain-containing protein 19
4dul_A6e-441016817171NAC domain-containing protein 19
4dul_B6e-441016817171NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009599412.10.0PREDICTED: NAC domain-containing protein 53-like isoform X1
TrEMBLA0A1J6KMA50.0A0A1J6KMA5_NICAT; Nac domain-containing protein 78
STRINGXP_009599412.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-127NAC domain containing protein 53