PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf01078g00514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | MYB_related | ||||||||
Protein Properties | Length: 511aa MW: 57459.2 Da PI: 5.5952 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.7 | 1.3e-08 | 460 | 508 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW++ E++ l +v+++G g+W++I + + R + ++k++w+++ Peaxi162Scf01078g00514.1 460 KRWSALEEDTLRSGVQKYGVGNWRLIFDNFReifEERNPGDLKDKWRNL 508 69********************************99***********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.277 | 454 | 511 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.8E-10 | 455 | 509 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.28E-13 | 456 | 509 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 6.1E-8 | 458 | 511 | IPR001005 | SANT/Myb domain |
CDD | cd11660 | 9.82E-15 | 460 | 509 | No hit | No description |
Pfam | PF00249 | 1.1E-6 | 460 | 508 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0009901 | Biological Process | anther dehiscence | ||||
GO:0010152 | Biological Process | pollen maturation | ||||
GO:0043067 | Biological Process | regulation of programmed cell death | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence Send to blast |
MDIDISRWIL EFILSQPLED NILNAIIEVV PLPKDDVRLN KALILARIQS EISNGSVSEK 60 ILKYLDLMEQ LYYQEGVETS EAMKAAYCAV AVDCTVRFLG KETEKLKYVE AVGRIWIKRI 120 NNMTENVGVS SKELWKWGKE IEEAVWDDSC HHNLIMRGHS IVAVDAVKAF VKEAKDRIGP 180 SFLEVMAEAL MRDDAVKACL SWGNKDEDDE SRRRTQSLSS AGQDLAGTKH HLDNLDTMNV 240 CGKYVQSLLY YICFITVIYL LAEAKMQNAL PSRNHVAFKR TKGTLAGVCK GVKIVDSTEQ 300 GVEASRGQDD LLSSPKIDEA QESLKLSSLE LRAAVKDPLP EALDLAETLM SLDKDNSAQQ 360 PVEDDQRAPQ LVVDGNGVVQ ANGGNEDDQH CCNHNAAPKP SLMARNDTAH IFEWNDSIDN 420 LSGGSPSSDR RFILPSPRRV KVSPLKKYEF KKVSTRRKAK RWSALEEDTL RSGVQKYGVG 480 NWRLIFDNFR EIFEERNPGD LKDKWRNLTS S |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019250121.1 | 0.0 | PREDICTED: uncharacterized protein LOC109229215 isoform X1 | ||||
Refseq | XP_019250122.1 | 0.0 | PREDICTED: uncharacterized protein LOC109229215 isoform X1 | ||||
Refseq | XP_019250123.1 | 0.0 | PREDICTED: uncharacterized protein LOC109229215 isoform X1 | ||||
Refseq | XP_019250124.1 | 0.0 | PREDICTED: uncharacterized protein LOC109229215 isoform X1 | ||||
Refseq | XP_019250125.1 | 0.0 | PREDICTED: uncharacterized protein LOC109229215 isoform X1 | ||||
Refseq | XP_019250126.1 | 0.0 | PREDICTED: uncharacterized protein LOC109229215 isoform X1 | ||||
TrEMBL | A0A1J6ISS5 | 0.0 | A0A1J6ISS5_NICAT; Uncharacterized protein | ||||
STRING | XP_009587848.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3774 | 24 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06910.1 | 1e-15 | TRF-like 7 |