PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01071g00011.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family CAMTA
Protein Properties Length: 1034aa    MW: 115422 Da    PI: 6.0403
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01071g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1106.51.8e-332095277
                      CG-1  2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg 77
                              l+ ++rwl++ ei++iL n++ ++++ e+++rp+sgsl+L++rk++ryfrkDG+sw+kkkdgktv+E+he+LK + 
  Peaxi162Scf01071g00011.1 20 LEAQHRWLRPAEICEILRNYQTFKIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKGNR 95
                              5679*********************************************************************765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143748.57315159IPR005559CG-1 DNA-binding domain
SMARTSM010763.3E-3718123IPR005559CG-1 DNA-binding domain
PfamPF038591.5E-282196IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.107.0E-5445530IPR013783Immunoglobulin-like fold
SuperFamilySSF812966.53E-16446532IPR014756Immunoglobulin E-set
PfamPF018339.3E-5446524IPR002909IPT domain
Gene3DG3DSA:1.25.40.201.7E-19630744IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029719.678632743IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484033.73E-19633743IPR020683Ankyrin repeat-containing domain
CDDcd002043.60E-14637740No hitNo description
PfamPF127969.8E-9654744IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0011682711IPR002110Ankyrin repeat
PROSITE profilePS5008810.392682714IPR002110Ankyrin repeat
SMARTSM00248120721750IPR002110Ankyrin repeat
SuperFamilySSF525402.39E-6853908IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001523857879IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.492859887IPR000048IQ motif, EF-hand binding site
PfamPF006120.14860878IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0042880902IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.285881905IPR000048IQ motif, EF-hand binding site
PfamPF006124.6E-4883902IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1034 aa     Download sequence    Send to blast
MANSRGYALN AQLDINQILL EAQHRWLRPA EICEILRNYQ TFKIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKGNRTNFSR IREPQQATPD FQETDDVHSS  120
EVESSASAKF YPNDYQVNSQ VTDTTSLSSA QASEYEDAES VYNQHSTSGF HSFLDAQPSM  180
MQNGGDAVPY RPVPFSNDHQ VQFAGSSDMN FSSIAPGNKG GNIENTYVPS RNLDLSWENI  240
SVNNPAAYQS YLYQPSSQSD ANNLMHEQGN ATLGQVFSND LKREEPQNRT DGLGDWRTSE  300
GGSSFISKWS MDQKLNPDLA SGGQQHKHPM QNELQSQLPD ANVGGSLSAD LHHNLSVGIK  360
ADYPAIKQPL LDGVLRAGLK KLDSFDRWMS KELEDVSEPH MQSNSSSYWD NVGDEEGVDN  420
STIASQVQLD SYMLSPSLSQ DQFFSIIDFS PNWAFAESEI KVLITGKFLK SQQEVEKCSW  480
ACMFGELEVP AEVIADGVLR CHTPIQKAGR VPFYITCSNR LACSEVREFE FRVTDVQDVD  540
VTNANTCSSS ESLLHMRFGK LLSLESTASQ NSPPSCEDDV SHMCSNINSL LKEDDSEWDE  600
MLHLTYENNF MAEKVKDQLL QKLLKEKLRV WLLQKVVEGG KGPNVLDEGG QGVLHFAAAL  660
GYDWAIPPTI AAGVSVNFRD VNGWTALHWA ASYGRLRTVG FLISLGAAPG ALTDPTPKHP  720
SGRTPADLAS SNGHKGIAGY LAESSLSSHL SFLGLKEKNQ VENVQAFGVE DVQTASERTA  780
TPAWEGDWPH GVSLKDSLAA VRNATQAAAR IHQVFRVQSF QRKQLKEYGG SEFGLSDERA  840
LSLLALKTKR AGHHDEPVQA AAVRIQNKFR SWKGRRDYLL IRQRIIKIQA HVRGHQVRNK  900
YKNIIWSVGI LEKVILRWRR KGSGLRGFKP EALAEGSNTQ DQPVQEDDYD FLKEGRKQTE  960
VRLQKALARV KSMVQYPEAR DQYRRLLNVV SDMKEPKAAN DGAPSRSVEA ADFGDDLIDL  1020
DDLLDDDTFM PTAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4hb5_A3e-1263374120122Engineered Protein
4hb5_B3e-1263374120122Engineered Protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:18298954, ECO:0000269|PubMed:19122675, ECO:0000269|PubMed:19270186, ECO:0000269|PubMed:21900483, ECO:0000269|PubMed:22345509, ECO:0000269|PubMed:22371088, ECO:0000269|PubMed:23072934, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25157030, ECO:0000269|PubMed:28351986, ECO:0000269|PubMed:28407487, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269|PubMed:11162426, ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:22345509}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0134810.0BT013481.1 Lycopersicon esculentum clone 132164R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009613616.10.0PREDICTED: calmodulin-binding transcription activator 3 isoform X2
SwissprotQ8GSA70.0CMTA3_ARATH; Calmodulin-binding transcription activator 3
TrEMBLA0A1S3YKL00.0A0A1S3YKL0_TOBAC; Calmodulin-binding transcription activator 4
STRINGXP_009613615.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1
Publications ? help Back to Top
  1. Zhang L,Du L,Shen C,Yang Y,Poovaiah BW
    Regulation of plant immunity through ubiquitin-mediated modulation of Ca(2+) -calmodulin-AtSR1/CAMTA3 signaling.
    Plant J., 2014. 78(2): p. 269-81
    [PMID:24528504]
  2. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  3. Rahman H,Yang J,Xu YP,Munyampundu JP,Cai XZ
    Phylogeny of Plant CAMTAs and Role of AtCAMTAs in Nonhost Resistance to Xanthomonas oryzae pv. oryzae.
    Front Plant Sci, 2016. 7: p. 177
    [PMID:26973658]
  4. Benn G, et al.
    Plastidial metabolite MEcPP induces a transcriptionally centered stress-response hub via the transcription factor CAMTA3.
    Proc. Natl. Acad. Sci. U.S.A., 2016. 113(31): p. 8855-60
    [PMID:27432993]
  5. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]
  6. Lolle S, et al.
    Matching NLR Immune Receptors to Autoimmunity in camta3 Mutants Using Antimorphic NLR Alleles.
    Cell Host Microbe, 2017. 21(4): p. 518-529.e4
    [PMID:28407487]
  7. Kim YS, et al.
    CAMTA-Mediated Regulation of Salicylic Acid Immunity Pathway Genes in Arabidopsis Exposed to Low Temperature and Pathogen Infection.
    Plant Cell, 2017. 29(10): p. 2465-2477
    [PMID:28982964]
  8. Jacob F, et al.
    A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana.
    New Phytol., 2018. 217(4): p. 1667-1680
    [PMID:29226970]