PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00842g00021.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 341aa    MW: 38378.7 Da    PI: 9.0227
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00842g00021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.38e-081141363153
                       AP2  31 fslgkfgtaeeAakaaiaarkkl 53 
                               ++lg+f+tae Aa+a+++a++k+
  Peaxi162Scf00842g00021.1 114 VWLGTFDTAEAAARAYDEAALKF 136
                               7*******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.246.204.7E-81489IPR003101Coactivator CBP, KIX domain
PfamPF169874.1E-311489IPR003101Coactivator CBP, KIX domain
SuperFamilySSF470402.35E-61488IPR003101Coactivator CBP, KIX domain
PROSITE profilePS5103210.08686152IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-10113137IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-6113137IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003712Molecular Functiontranscription cofactor activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MYDNNRRGLM YTPADWQTQL LPDARQRIVN KILETLLRHL PVTGQEAREE LSKIAVKFEG  60
KIFDAATSQP DYLRKISLKM LTLQTKSQNL MTKPNTATSG QNAHGPGEQS EFMVWLGTFD  120
TAEAAARAYD EAALKFSAFL DHTAQMGNAN GADWQEEIYQ KIMSMNEISL PELNDLFQRI  180
ASKMQQTKDR AACAMGCGRQ GTCCDHVDRL DGSFDGLGSG WNGSCISTWG FDSNFHGLSF  240
GAKLDQRLGM VEERLEKIEA HSKKVDTLLV EINKTMNNLV RIQDAKVSRT SYRQSKWRPK  300
MKRKSCKHRR LVLGKGAVGV VSPVDDCAQD VQRKHKNVDD K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028955287.13e-45mediator of RNA polymerase II transcription subunit 15a-like isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15790.24e-22