PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00716g00032.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 400aa    MW: 44982 Da    PI: 9.0445
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00716g00032.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-184695255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              +y+GVr+++ +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+ +l+g
  Peaxi162Scf00716g00032.1 46 HYRGVRRRR-WGKWVSEIREPRK---KSRIWLGSFSSPEMAARAYDVAAYCLKG 95
                              69****777.**********843...6************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.01E-3145104No hitNo description
PfamPF008475.4E-124695IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-2146105IPR016177DNA-binding domain
SMARTSM003807.2E-3746109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.3E-3146104IPR001471AP2/ERF domain
PROSITE profilePS5103223.56546103IPR001471AP2/ERF domain
PRINTSPR003678.2E-124758IPR001471AP2/ERF domain
PRINTSPR003678.2E-1285105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MTSDCFAMEQ REPLPPCNEN NISTSPVNTN CRKIDIHKGS NTRHQHYRGV RRRRWGKWVS  60
EIREPRKKSR IWLGSFSSPE MAARAYDVAA YCLKGCKAQL NFPDEIEHLP RPKTCMPRDI  120
QAAAAIAANN ANIVRKKNNE DCVCDDFWTE IELPELKDAG KECLSSESSL NRSDYLYSHE  180
TTLSLTNPTT YIAVGAKAEP NSTPKHPLFS VPAMQSEQKE MVNSPIHTLA SVPFQWEEKP  240
GKPRPCTELI TLPKSSFNEP TKCLEPPPRL YSPSPTTVLD GPCIDVKPKF SSSSFRFLRN  300
LKGSFDSTET EQVSTFVLGK KKLHRGNWWQ RNVKLKGAGN SCVFSSSFMD STDYSGIIDK  360
GRSCSARMPS FRSNGSLSSL SSKSHTWVSV TIISIYTSYY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1938105674Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14253RHQHYRGVRRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138741314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.15e-38ERF family protein