PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00684g00027.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 162aa    MW: 18665 Da    PI: 8.4731
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00684g00027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.23e-123088563
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                              ++ +r+ +NRe+ArrsR +K++ ++eL   v  L++eN +   +++  ++++ ++++e+
  Peaxi162Scf00684g00027.1 30 RKRKRMLSNRESARRSRMKKQKHLDELMVQVTILKKENCQILTNMNVTTQHYLNVEAEN 88
                              67899*********************************999999999888888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-92570No hitNo description
SMARTSM003381.0E-152690IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.8292891IPR004827Basic-leucine zipper domain
PfamPF001701.6E-93078IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-113082No hitNo description
CDDcd147025.59E-173181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MASSSGTSTS SSILQNSGSS EDLKQIMDQR KRKRMLSNRE SARRSRMKKQ KHLDELMVQV  60
TILKKENCQI LTNMNVTTQH YLNVEAENSI MRAQVVELRQ RLESLNEIIT FLNVNDNGHH  120
EENNYNFNIA QNVSLADGLT MNNSWNNVYV NQPIMTSDIL QY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12950RKRKRMLSNRESARRSRMKKQK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240546.11e-72PREDICTED: bZIP transcription factor 11-like
SwissprotC0Z2L54e-46BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A1J6K5193e-71A0A1J6K519_NICAT; Bzip transcription factor 11
STRINGXP_009802821.13e-71(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-43basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]