PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Peaxi162Scf00497g00041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 24020.7 Da PI: 6.0717 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.3e-17 | 27 | 77 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g++v+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g Peaxi162Scf00497g00041.1 27 KKYKGVRMRS-WGSYVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 77 59*****998.**********9...336*************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.05E-17 | 27 | 87 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 4.1E-27 | 28 | 87 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.2E-10 | 28 | 77 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.6E-30 | 28 | 91 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.745 | 28 | 87 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.16E-17 | 28 | 87 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 6.3E-8 | 29 | 40 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.3E-8 | 51 | 67 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0034605 | Biological Process | cellular response to heat | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 221 aa Download sequence Send to blast |
MVKTEQKTLP ESNKTMALSS SSNNMKKKYK GVRMRSWGSY VSEIRAPNQK TRIWLGSYST 60 PEAAARAYDA ALLCLKGPSA SSNLNFPCNS SFYHHLTHPS DHTLSPKAIQ RVAAAAAAVV 120 EGGGNGSSTS HDNPISPSPP LSSTSTSSSP LSHGDQDDLS ILDYTFDHCV EETGVSMIGQ 180 WYNFDSPKYN DMLHGTIFCD PPSMEDVYEE GAADIPLWSF C |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}. |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00156 | DAP | Transfer from AT1G21910 | Download |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | FJ228457 | 5e-44 | FJ228457.1 Glycine max AP2 domain-containing transcription factor 5 (AP2-5) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_009592101.1 | 4e-74 | PREDICTED: ethylene-responsive transcription factor ERF014-like | ||||
Swissprot | Q9SFE4 | 8e-42 | ERF12_ARATH; Ethylene-responsive transcription factor ERF012 | ||||
TrEMBL | A0A2G3CLK5 | 1e-80 | A0A2G3CLK5_CAPCH; Ethylene-responsive transcription factor | ||||
STRING | XP_009592101.1 | 1e-73 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6177 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-29 | ERF family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|