PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00493g00220.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 282aa    MW: 31473.6 Da    PI: 8.4624
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00493g00220.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0011220242223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                               +Cp C+ +Fs+   L  H ++ H
  Peaxi162Scf00493g00220.1 220 QCPQCHLRFSTVRALIDHVQKvH 242
                               7*****************99988 PP
2zf-C2H215.45.3e-05254276223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                               +Cp C+k F+++  L+ H  + H
  Peaxi162Scf00493g00220.1 254 VCPRCSKGFRDPVALVEHVEReH 276
                               7*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183101.14E-10752No hitNo description
Gene3DG3DSA:4.10.1110.101.7E-81054IPR000058Zinc finger, AN1-type
PROSITE profilePS510397.3241055IPR000058Zinc finger, AN1-type
PfamPF014282.2E-111351IPR000058Zinc finger, AN1-type
SMARTSM001540.0231352IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.6E-1091148IPR000058Zinc finger, AN1-type
SuperFamilySSF1183103.27E-993148No hitNo description
PROSITE profilePS510397.93698145IPR000058Zinc finger, AN1-type
PfamPF014283.1E-8101141IPR000058Zinc finger, AN1-type
SMARTSM001540.0042101142IPR000058Zinc finger, AN1-type
SMARTSM003550.014219242IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280221242IPR007087Zinc finger, C2H2
PROSITE profilePS501579.037253281IPR007087Zinc finger, C2H2
SMARTSM003557.1253276IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280255276IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MGTPAFPNLG KHCSDEDCRQ IDFLPFTCDC CHKVYCLDHR SYNRHHCPTA NKNNVTVVIC  60
PLCAKGVRLN PDEDPNITWG SHVNTECDPS NYEKATKKRK CPVPRCRELL TFSNTIKCRD  120
CTVDHCLKHR FGPDHNCPGP KKPEPSFQFM NFLNGSKEEP KKAQSSSPSR WTTGLLKVVS  180
SVKEKLSSEF SQTHQTGKEG GGPSSRATSR NGNASSQVEQ CPQCHLRFST VRALIDHVQK  240
VHEKNGVMNL AVDVCPRCSK GFRDPVALVE HVEREHKGTS SA
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754431e-149HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019230516.11e-179PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like
SwissprotQ8VZ421e-113SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A2G2XAH51e-178A0A2G2XAH5_CAPBA; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
STRINGXP_009610975.11e-178(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53112237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-115C2H2 family protein