PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Peaxi162Scf00484g00012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 141aa MW: 16168.2 Da PI: 8.7436 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41 | 4.2e-13 | 25 | 75 | 4 | 54 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 k+ +r+++NRe+ArrsR +K+ +eL+e+v L+a N++ +++ee ++ Peaxi162Scf00484g00012.1 25 EKKRKRMISNRESARRSRMKKQNLAQELTEEVSRLQAANRTIVDKIEETTE 75 5999***********************************988888877665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.6E-16 | 22 | 86 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.8E-11 | 23 | 77 | No hit | No description |
PROSITE profile | PS50217 | 10.3 | 24 | 87 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.53E-10 | 26 | 79 | No hit | No description |
Pfam | PF00170 | 1.6E-10 | 26 | 76 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.25E-13 | 27 | 77 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 29 | 44 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 141 aa Download sequence Send to blast |
MSSLRQSGSS TSASEGDQRY AAMDEKKRKR MISNRESARR SRMKKQNLAQ ELTEEVSRLQ 60 AANRTIVDKI EETTERLTIY TAQNNVLRAQ EMELTDRLKS LNDLIEHSGL VTDVADPLLK 120 PWQNTCSMQP IHTFSSCLFQ F |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_009779504.1 | 1e-75 | PREDICTED: ocs element-binding factor 1-like | ||||
TrEMBL | A0A1U7WXW1 | 3e-74 | A0A1U7WXW1_NICSY; ocs element-binding factor 1-like | ||||
STRING | XP_009779504.1 | 5e-75 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11126 | 15 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G62420.1 | 2e-32 | basic region/leucine zipper motif 53 |