PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00479g01010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 195aa MW: 22916.2 Da PI: 5.0816 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.7 | 1.4e-14 | 87 | 137 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++rr+++NRe+ArrsR RK++ ++eL v L +eN++L ++l+ ++ Peaxi162Scf00479g01010.1 87 RKQRRMISNRESARRSRMRKQKHLDELWSQVIWLRNENHQLLNKLNDVSES 137 689**************************************9776665543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.1E-14 | 83 | 147 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 85 | 148 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.5E-12 | 87 | 160 | No hit | No description |
Pfam | PF00170 | 1.8E-12 | 87 | 143 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.19E-13 | 87 | 136 | No hit | No description |
CDD | cd14702 | 8.74E-21 | 88 | 139 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 90 | 105 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence Send to blast |
MQPTDVTELY YLLPSNNQPQ HPSQFNSNYD NYISTFIQSS RISSPLHSLQ IGPPIQEINP 60 QTNYFFNCNY STCDETDEQL LTLINERKQR RMISNRESAR RSRMRKQKHL DELWSQVIWL 120 RNENHQLLNK LNDVSESHDQ ALEENAKLKE ETSELRQMVT NMQLMNSSNY PCLRDNFDDE 180 PCSGSSHNEK QNSGD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 106 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009588233.1 | 3e-96 | PREDICTED: basic leucine zipper 43-like | ||||
Refseq | XP_016484738.1 | 3e-96 | PREDICTED: basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 2e-43 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A1S4B7G7 | 6e-95 | A0A1S4B7G7_TOBAC; basic leucine zipper 43-like | ||||
STRING | XP_009588233.1 | 1e-95 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 3e-47 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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